EST details — SGN-E371084

Search information 
Request: 371084Match: SGN-E371084
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178661Clone name: TUS-29-L19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178661 is on microarray TOM1 spot ID 1-1-6.4.3.2 [Order] [Tomato Microarray Database]
See unigene SGN-U579745 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C72338 [cLER-1-O10] Trace: SGN-T91930 EST: SGN-E280376 Direction: 5' Facility: TIGR
Clone: SGN-C178661 [TUS-29-L19] Trace: SGN-T184152 EST: SGN-E371083 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371084Length: 705 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371084 [] (trimmed) CAAAAAGGTCCTGAGGAATGGCTCATGCTATGGCTTCTATGGGTGGCCTAATTGGTTCTTCACAAACTGTCTTGGATGGTAGCCTCCAGCTTAGT
GGCTCAGCCCGCTTGAGTACTGTTAGCACCAACAGAATTGCCTTGTCTAGACCAGGACTCACTGTCAGAGCCCAACAGGGGTCTGTTGACATCGA
AACTAGCCGTAGAGCCATGATTGGTCTTGTTGCTGCTGGCCTAGCTGGTTCCGTTGCTAAAGCAGCTTTTGCTGAAGCCAGGTCAATTAAGGTTG
GCCCCCCACCTCCTCCCTCGGGTGGATTGCCTGGAACTTTGAACTCAGATGAGGCAAGGGACTTCAGTTTGCCATTGAAGAATAGGTTTTACCTT
CAACCGTTGACTCCAGCTGAGGCAGCCCAGAGAGTTAAGGATTCAGCCAAGGAGATTGTTAGTGTCAAGGATTTCATCGACAAGAAGGCCTGGCC
TTACGTCCAGAATGACCTTCGTCTCAGAGCAGAATACCTTCGCTATGACCTTAAGACTGTTATCTCTGCTATGCCAAAAGAACAGAAGGGAAAAC
TCCAGGATCTGTCTGGAAAGCTCTTTAAGACCATTAGTGATCTGGACCATGCAGCAGAGACCAAGAACAGTGCTGAAGCACAGAAGTACTATGCT
GAAACTGTTACTACTTTTAATGATGTTTTGGCCAACCTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371084] SGN-U579745 Tomato 200607 Build 2 181 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184153 [Download][View] Facility Assigned ID: FA0AAD17CF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5