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EST details — SGN-E371339

Search information 
Request: 371339Match: SGN-E371339
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177677Clone name: TUS-27-C19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177677 is on microarray TOM1 spot ID 1-1-6.3.6.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C47506 [cLEI-16-H19] Trace: SGN-T83415 EST: SGN-E269191 Direction: 5' Facility: TIGR
Clone: SGN-C177677 [TUS-27-C19] Trace: SGN-T182848 EST: SGN-E371340 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371339Length: 668 bp (915 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371339 [] (trimmed) AAACAGAAACGAGTATTCAAATCAAATTATAAGCTTCTTAAACAGTGAAGCAATATTGCTTTGATGAAATAATATGAAACTTCAAGTACATGCTC
ACAACCTTGGGGCTGGAAGAGCAGCATGGGGGGTGTCCCATTCAGTGACAATGGGGTTTCTAGTAATCTCCTTCAGTGAGCGACAGCCACTCAAT
GCCATAGTTAGCTCAAACTCATCGCGCAACATTTGCAGCACTTTTTTCACTCCAGCTTCTCCTTCAGCAGCCAATGAAAAAACTACTGGCCTTCC
AATAAAAATGCCTGAAGCTCCAAGTGCCAAAGCTTTAAAGACATTTGTTCCACGGGGGACACCTCCATCCAAGAATACGGGGATCCTGCCTTGTG
CACCTTTCACAACCTTTTCAAGAGCCGAGATTGTTGCAGGGACATAATCGAGCTGGCGAGCACCATGGTTTGACACAATGATACCAGCTGCTCCA
GCCTGAACTGCAAGCCTAGCATCCTCAGCCGTAATTACACCCTTCACCAGGATTGGCATTGAAGTGATAGTCTGGAGCCACTGAACATCCTTCCA
GCTCAAAGTGCGATCAATTTGACCAGCAACATACGAAGCTAAGCCAGAGTCATTAGCTTTGGCCATTTTGCCAAGGGCCAATCCTTTAAAGTTTT
TTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371339] SGN-U578941 Tomato 200607 Build 2 184 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182847 [Download][View] Facility Assigned ID: FA0AAD15AB10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0078 Quality Trim Threshold: 14.5