EST details — SGN-E371404

Search information 
Request: 371404Match: SGN-E371404
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178406Clone name: TUS-29-B4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178406 is on microarray TOM1 spot ID 1-1-5.2.4.13 [Order] [Tomato Microarray Database]
See unigene SGN-U577411 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C65315 [cLEM-8-P14] Trace: SGN-T85636 EST: SGN-E272085 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E371404Length: 681 bp (912 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E371404 [] (trimmed) GATTCTATTAAACAGCGGAACCCTAAAAACCCTTTTCTGCCACCATTACCGCCGCATCGCCGCCACCATGAACGACGACGGGTTTTCAGCAGAGA
AGTTGTTCAATCAAGGCTACTCCTATACCTACGACGATGTCATCTTCCTCCCTGGTTTCATCGACTTCCCTACCGATGCCGTCAACCTCTCTACT
AAGCTCAGCCGCAATATTTCCCTTTCCATCCCATGCGTAGCTTCTCCGATGGACACCGTCACTGAGACCTCCATGACCGTAGGAATGGCGGCGCT
AGGTGGTATAGGTATCGTTCACTACAACAACACCATTTCGCAACAAGCTTCTATTATCCGCGCTGCTAAGTCTCATCAAATCCCTTTCTCATCGG
ATTTGATATTTGCTTCCCCTTCCGATTCTATCCATTCTGCTGATGAATTCGGTAACTCTCCTTGTATTTTCGTCACTGAGTCAGGAACTAAGGAA
TCCAAATTTTTAGGAGTTGTGTGTAAGTCTACTTGGAACGGTTTGAGTGACAAGCAAGCTAGAATTTCTGATTATATGAACGTTTCTCCGGTCAC
TCTGCCTTCAAGCTATAATTTTGAGGACGTAGCAGGCTACATAGCATCTAAAAAGCTGGACTTTGTACCATTGGTGAATGAAAAGGATAGGGAAG
TGGTCAATTTGGTGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371404] SGN-U577411 Tomato 200607 Build 2 52 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184171 [Download][View] Facility Assigned ID: FA0AAD17DA02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5