EST details — SGN-E371515

Search information 
Request: 371515Match: SGN-E371515
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178614Clone name: TUS-29-J20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178614 is on microarray TOM1 spot ID 1-1-5.2.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72272 [cLER-1-K7] Trace: SGN-T91865 EST: SGN-E280311 Direction: 5' Facility: TIGR
Clone: SGN-C72272 [cLER-1-K7] Trace: SGN-T91866 EST: SGN-E280312 Direction: 3' Facility: TIGR
Clone: SGN-C178614 [TUS-29-J20] Trace: SGN-T184283 EST: SGN-E371516 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371515Length: 854 bp (untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371515 [] (untrimmed)
GTATGCATCGAACTACGTAAGGGCGAATTGGGTACCGGGCCCCCCCTCGAGTTTTTTTTTTTTTTTTTTCAGAAACTAGCACGAATCTATGCTAT
GTAGGATAGATATAAAAGTATGGATTTTGTTTTCTCTGCACATGTATGTCCCTACTTCTATACATCCAGAGATGAGCTTGAAAATGTTACTCAAA
AAATTGAAAGAAAAACAATAAAACGGTAAGAGATAACAATGAATGAATTTTTGTAAAGGGCCCCCTAAGTATAGCCCCGTATCATATCTAAAACT
GAGCCTGCAGCCCGGGGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCTTTAGTGAGGGTTAATTTCGAGC
TTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGC
CTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAAT
GAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGG
CGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAGTTCAAAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T184282 [Download][View] Facility Assigned ID: FA0AAD17DE10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Problems: Possibly chimeric (anomalous insert into vector)
Sequence Entropy: 0.916 Expected Error Rate: 0.0033 Quality Trim Threshold: 12.5