EST details — SGN-E371608

Search information 
Request: 371608Match: SGN-E371608
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178642Clone name: TUS-29-K24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178642 is on microarray TOM1 spot ID 1-1-1.3.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72313 [cLER-1-M7] Trace: SGN-T91877 EST: SGN-E280323 Direction: 5' Facility: TIGR
Clone: SGN-C72313 [cLER-1-M7] Trace: SGN-T91878 EST: SGN-E280324 Direction: 3' Facility: TIGR
Clone: SGN-C178642 [TUS-29-K24] Trace: SGN-T183938 EST: SGN-E371609 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371608Length: 660 bp (852 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371608 [] (trimmed) TGATCAGTATATTGAAATTGTACAAAGTAGCAAACATCTGTAGGAACTAAAACAAGAAGAAAATTACATCAAACATAGCTTATTCGCAATGATAT
GTTCATTATTTCTAGCACAAAATGCAGAGACAGCACCGCCGAGTCCAGACTCTAGAGCTTAAGCAACACCCAAGAGTTTCTTGATATCCTTCTCC
ATGCTAGCTGGAGAAGTGGTTGGAGAGTAGCGATCAACGACATGTCCTTCTTTGTCAATGAGGAATTTGGAGAAGTTCCACTTGATACCATCTCC
AAAGAACCCACCTTTGCTTGATTTCAGAAACCTATATAATGGAGCAGCATTATCACCATTCACGTCAACCTTGTCAAATATGGGGTACTCAGCCT
TGAAGCGAGTGCAGACCATTTGCTGGATATCTTCAATGTTTCCAGGCTCCTGTCCACCAAACTGGTTGCAAGGGAAGGCCAGAATCTCCAAACCT
TGATCCTTGTACTTCTTGTATAACTCCGTCATGTCAGTGTAGTTCGAATTAGTCAGGCCACTGCATCAGAAAATGGAATCAGTTAACAGTCATAA
GCAAATGTAACAAGATCAAAGAATGATATCATAAATACAACAAGTAACTGCTCAAACCTTTCACAGTAAACACAATGAAATCAAATTATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371608] SGN-U578117 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183937 [Download][View] Facility Assigned ID: FA0AAD17BF12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5