EST details — SGN-E371643

Search information 
Request: 371643Match: SGN-E371643
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178480Clone name: TUS-29-E6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178480 is on microarray TOM1 spot ID 1-1-3.1.4.14 [Order] [Tomato Microarray Database]
See unigene SGN-U565998 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C178480 [TUS-29-E6] Trace: SGN-T183971 EST: SGN-E371642 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371643Length: 493 bp (902 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371643 [] (trimmed) TAACACAGAGCAAATAAAAATGGCGTCCATAGCCGGTGTTAGTATAACAATCCCAACAATTTCATCCGATTCACCCAAAATTCAGCCCTTGAAAT
TGCAAACCCTAAACAGCCCATGGAAGAAATCAAGTCAATTGGGTTACAGGAGGATGATGTATGTAGTGGTACCCAGAGTAGTTCCGGATAAGAAG
CTATCTGATTTAGTTGCGGAAAGTGTTAAAGAAGCTGAAGAAACTTGTGCGGAGGATCCGGTGAGCGGCGAGTGTAAGGCGGCATGGGATGTGGT
GGAAGAGACGAGTGCAGCAGCGAGCCATGCGAGGGATAAGAAGAAGGAATCAGATGTACTGGAGAATTATTGCAAGGATAATCCAGAAACTGATG
AATGCCGCACTTACGATAATTAATTATGATGATGATTAGTAGCAGCTACTCATGTCATGTCTTGTGTTCTTTTCAAATGGTAATCTGTTTTATCA
AAACTTAAATCTTCTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371643] SGN-U565998 Tomato 200607 Build 2 50 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183972 [Download][View] Facility Assigned ID: FA0AAD17BC03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5