EST details — SGN-E371677

Search information 
Request: 371677Match: SGN-E371677
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178634Clone name: TUS-29-K16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178634 is on microarray TOM1 spot ID 1-1-1.3.4.19 [Order] [Tomato Microarray Database]
See unigene SGN-U578781 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C72302 [cLER-1-M18] Trace: SGN-T91929 EST: SGN-E280375 Direction: 5' Facility: TIGR
Clone: SGN-C178634 [TUS-29-K16] Trace: SGN-T184005 EST: SGN-E371676 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371677Length: 652 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371677 [] (trimmed) GAAGAACAAAAAATCTGTTTAAAGGTATTAATTTCGAAAAAGCAATATGGCATTAGTTTCTGGAGGAAGATCAACGCTGAATCCAAATGCGCCCC
TCTTTGTTCCTTCATTTGTGCGCCAGGTAGAGGATTTTTCACCAGAATGGTGGAACTTGGTGACAACTTCAACATGGTTCCATGACTACTGGATG
AGCCAGAACCAGGGAGAGGAATATGGTGCTGGTAATGATGTTGCTGATTTGCTTCCTGAAAATATTGATCTCAATGTTGATGAGGACATCTTGAA
CATGGAAGCTCAGTTTGAGGAATTTCTTCAATCTTCCGAAAATGAGCAACAAGGAATTAAGTCATCTCTCTATGGTGTCAATGCGATGCCACAAT
ATGGTTTACCATCTGATGCACTGATTAGAACATTGAGTTCACCAAGATCCCCCATTGGTCCACCCAAATACTTTGAGAAGCCATCCAAGATCGTG
AGCCCGAGGAACAGTTTCCGCAGCATCCAGCAGCCTCGTTGAATTCCCAGTCTCTTGGTTTACTTTCAGGAAGTCAGATGTTAGTTTGCAGCAGT
TTAGAAAGTCTTCAAGTTTTAGTTTCATGTAACCTTTGTATAGAGCAAGGTANGTGTCACTCTTGTATCTAGCCTTGTTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371677] SGN-U578781 Tomato 200607 Build 2 90 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184006 [Download][View] Facility Assigned ID: FA0AAD17BF08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0180 Quality Trim Threshold: 14.5