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EST details — SGN-E371772

Search information 
Request: 371772Match: SGN-E371772
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179065Clone name: TUS-30-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179065 is on microarray TOM1 spot ID 1-1-2.1.2.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78698 [cLES-6-H5] Trace: SGN-T98618 EST: SGN-E287166 Direction: 5' Facility: TIGR
Clone: SGN-C179065 [TUS-30-M15] Trace: SGN-T184387 EST: SGN-E371773 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371772Length: 541 bp (917 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371772 [] (trimmed) CAAGAAAATTGTTAAAATCAGATTCAACATCAAAACTTTCTTGCAACAAGTGATAAATGAAGTTGTCAAACTCATCAATTGTAGCTACTTTTTCT
TAATAACAATCGGGCAACTTCTGAATAGGATCCAAAACAGCATCAAATCAAATGCCTCTTTCACTGGTCAAAAGGCAAGCTTTTAATAATATCAA
AATCACCTGGGTCAATAATACTGAGGCAACAAACTCTGAAGTATTTACCACAGGCAGTCCCCAAGTCTACGTTGTTTCCGTTGTAGTGGTGAACT
CCAACCTTTGCCAACATAGCATAGTACTCTATCTCAAACTTCCTGATAGGAGGACAGTTGTTGGCAATGATGACAAGTTTTGCTTTGGAACTTCT
AATTGTTTTGAGAACAGTTTTGTATCCCAATGTATACTTCCCGCTCTTCATAACAAGAGCGAGCCTGTTGTTGATACTCTCATGAGTCTTCTTGG
TCTTCTTTGCAGCCACCATCGTGGATTCCGGTGAGAAAGAACAACGTCGGAGATGGAGGATTTGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371772] SGN-U578401 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184386 [Download][View] Facility Assigned ID: FA0AAD18AG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0025 Quality Trim Threshold: 12.5