EST details — SGN-E371793
Search information |
Request: 371793 | Match: SGN-E371793 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178771 | Clone name: TUS-30-A9 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178771 is on microarray TOM1 spot ID 1-1-8.1.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C70636 [cLER-15-H13] | Trace: SGN-T95205 | EST: SGN-E282685 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178771 [TUS-30-A9] | Trace: SGN-T184406 | EST: SGN-E371792 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E371793 | Length: 326 bp (939 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E371793 [] (trimmed)
TTTAAAGATGTCGGCGGTGGTTCAGCTTCGCTGCTCTTCACTTCCAGCCCACTATCACTATCAAACTCTTTACTTTTCTGCTGTCAAACCCTCAT
TTTCAGACAACAGCTGACGTCAGCAAATCTCAGCTTTAACCCATTAACTACCAGCCATGTGGGTTCTAAACAATTGCTTATTAAGTATCAAGTTC
CTTGTGCTGGGTGGGGTGGTGGTGATGGAGGAAGCATTGCCATGGGGGGAGGAGGCGGTGGTGAGGGGGATTGACTGGAAGGGCGACCCTCGCAC
TAGTTCTAAAAGAACGAAGATACCAGTTGAAGCAGAGCAGA
TTTCAGACAACAGCTGACGTCAGCAAATCTCAGCTTTAACCCATTAACTACCAGCCATGTGGGTTCTAAACAATTGCTTATTAAGTATCAAGTTC
CTTGTGCTGGGTGGGGTGGTGGTGATGGAGGAAGCATTGCCATGGGGGGAGGAGGCGGTGGTGAGGGGGATTGACTGGAAGGGCGACCCTCGCAC
TAGTTCTAAAAGAACGAAGATACCAGTTGAAGCAGAGCAGA
Unigenes |
Current Unigene builds | |||||
[SGN-E371793] | SGN-U573626 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184407 [Download][View] | Facility Assigned ID: FA0AAD18AA05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0093 | Quality Trim Threshold: 14.5 |