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EST details — SGN-E371814

Search information 
Request: 371814Match: SGN-E371814
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178871Clone name: TUS-30-E13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178871 is on microarray TOM1 spot ID 1-1-4.1.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71280 [cLER-17-G21] Trace: SGN-T95958 EST: SGN-E283107 Direction: 5' Facility: TIGR
Clone: SGN-C178871 [TUS-30-E13] Trace: SGN-T184429 EST: SGN-E371815 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371814Length: 656 bp (927 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371814 [] (trimmed) CAGCAACATTAAATGTAATATTATCCACAGTAAAATCACAGCAATTACATATTAATGAAAATGCCAAAAAATATTTTGAAAAAATAACATGGAAT
ACAACTTAAACTTAATAGTACAATACAAGGATAACATTTATTGCCCCAAAGCACTTGTGTTGTAAACAAGGAAAGCACCTCCTGCAAAAATGCCA
AGCAGGGTCACCGCCCATATGGTTAACCCAGGGGTACCTCCAACATAAACATCACCATTTGGAAACCATTCATCCGTGTTGTAAATGGGACTGTA
TCCATCAACATTAGCTCCATATTTGTCAACATATTGGTACACACCCTTTCCTTTGGGCTTCCTGCCTGAGGCATCAACCCCATTTTTCAAGGCCA
TGCTTCCATTAATTCCATAGGGTTTGTCAGTCTTAAGCTTCTTAACACCACTACCCACAACTTTGAAGGAAAAAAAAAATCTAGTAAGTGATGGA
AGCCCTTTCACTGATATTTTCTCCAAAGTGAAAGTTGGTTTTAGGCTCAATGAGCCTTCAGGGCTGGATGCAAGAGCTGCTGTTATTGTTATGAA
AACTGTTAGGAACACTGTCGATACAGGAAGAACGGTTGTTTGTACTATCCATCAGCCAAGCATCGACATATTTGAAGCCTTTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371814] SGN-U581090 Tomato 200607 Build 2 465 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184428 [Download][View] Facility Assigned ID: FA0AAD18AC07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0159 Quality Trim Threshold: 14.5