EST details — SGN-E371843

Search information 
Request: 371843Match: SGN-E371843
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179051Clone name: TUS-30-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179051 is on microarray TOM1 spot ID 1-1-8.1.3.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179051 [TUS-30-M1] Trace: SGN-T184458 EST: SGN-E371844 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E371843Length: 715 bp (884 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371843 [] (trimmed) ATGATAAAGTTGTAGTCCGATCATATCGATTATTATGAAATTTTAATATTTTATAATTGGATACGATATAGTTAAAATAACAATCATCAAAACAA
ACATAAATACAATCGTTTCAGATGTTCAGCATGCAAAAAAATTCTCATAAAATATCATGCTTATTTGCACTCATAAATCTTATAGTAAATTAATT
TCTCATTTGATCAGTGCTTGTTGATGAACTCTGCAATGGCTTCAAAAAGCTTTTCAGTTGCAGAACCAGTAACAGGGTCCATATCAACAGCAATT
TTGTTCAGGTAAAAACTGTGTCCCACGCCATTGTTAATCAACAGTTCAACATCTTTTTCCCCTGTTTTCAGTGATTCGTAAAATTCCATTTCAGT
GTCTTTTATCAGATCCTTCTCCGCTACACAGTACAAGTAAGGCGGCAATTTCAGCTCCTCCACCGCCGGTGCCGCATCACCCATCGGACAAGTGA
TCGGGTGATCCTTAGTGCTACCAATCGGTAAAGCCAGTTCCATAAATTTATCCACCATATCTAAGGTTAGAAAGGGGGTTTGTTCCTGTTCTAGC
TCCGATTTGCTTCGCTGGGATCGCATGAAGCCTGGATGGATCGGGATTGCGCCGGCGAGCTTCATCGGAGATAAGTCTTCTTCTTCGGCTCTGGC
GGCAACTTGATGGACGACGTTTCCGCCGGAGCTGTCTCCGATGAGGAATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371843] SGN-U582565 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184457 [Download][View] Facility Assigned ID: FA0AAD18AG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5