EST details — SGN-E371860

Search information 
Request: 371860Match: SGN-E371860
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179105Clone name: TUS-30-O7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179105 is on microarray TOM1 spot ID 1-1-2.3.3.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78813 [cLES-6-N18] Trace: SGN-T98676 EST: SGN-E287224 Direction: 5' Facility: TIGR
Clone: SGN-C179105 [TUS-30-O7] Trace: SGN-T184473 EST: SGN-E371859 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371860Length: 641 bp (924 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371860 [] (trimmed) GTTTTCAAAGGAATTACCTGTAAAAATGGCTCCTCCTCACGGCGATAAGTCAGCAGAAGTCAAGGAGGAGGCCGCCGCCGCCGTTTCCTCAGTCG
ATAACCGCCCTATTTCCACCATCCTCTTCATCGTTGCTATGCAAACAGAGGCGTTACCTCTTGTTAAGAAGTTCCAGCTTACCGAGGACCTCAAT
TCCGTGTTCCCAAAGGGAGTCCCTTGGGTGCGGTTCTATGGTAATTACTTTGGTCTCACCGTTAATATTGTTTGTCCTGGGAAAGACCCAGCATT
GGGGGTTGATGGTGTGGGCACGGTTTCTGCATCTCTTGTGACATATGCTTCTGTCCAAGCATTAAAGCCAGACCTCATCATAAATGCTGGCACAG
CAGGTGGATTTGGGGCCAAAGGTGCTTCAATAGGAGATGTTTTTATTTCATCAGAAGTTGCTTTCCATGACAGAAGAATACCAATCCCGGTATTT
GATATATATGGAGTTGGTTCGCGGAAGGCTTTTGCTACACCCAATCTTCTGAAGGAGCTTAACTTGAAGGTAGGCAAGCTGTCTACTGGTGACTC
TCTAGATATGTCTCCAATGGATGAAGCATCTATCATTGCAAATGACGCAACAATCAAAGACATGGAAGGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371860] SGN-U573826 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184474 [Download][View] Facility Assigned ID: FA0AAD18AH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5