EST details — SGN-E371867

Search information 
Request: 371867Match: SGN-E371867
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178764Clone name: TUS-30-A2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178764 is on microarray TOM1 spot ID 1-1-7.1.3.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70627 [cLER-15-G4] Trace: SGN-T95334 EST: SGN-E282814 Direction: 5' Facility: TIGR
Clone: SGN-C178764 [TUS-30-A2] Trace: SGN-T1512 EST: SGN-E378695 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178764 [TUS-30-A2] Trace: SGN-T184557 EST: SGN-E371943 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371867Length: 594 bp (896 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371867 [] (trimmed) CAGCAAAGGTAACAAAAGTTTATTGCTTTAAAAAGGACCTCAGTTGGACTGTAAGTGATTAATATACAAACTGCATACATGGGAACCAACATGTG
CTGGATTTTTTTACAATATATAAGCATGAAAACATGTACTTGAAAGCAATTCATGGTTGGATTTTCTTCCCCTTTCACCTTTCTGAAGCTTGATA
TTAGGTGCCTTTTAGTTTTTGTACTTCATGGTTTCCTTCTCAAACCCAATTGTAGGGAACTGCTTACCATACTCCTCCACATCCTGACGGAGTTT
TGCAATTTCAAACTTGATTGGAGCACTGGATTTTAGTGTTGATACAAAGTCTTTCAACTTTGTCCCTTGAGTTTCAGCCTTTACTTTCACTGCTA
TCTTCACAGCAGCATCAAAAAAATCAGCAACTTTAACAAAATCTTCCTCAAAAAATCCCCGAGAAGTGAGTGCAGGAGTTCCCATTCTGATGCCA
CCAGGGACCATGGCAAAAACATCTCCAGGAACGGTGTTCTTGTTGGCTGCAATATGTACAGTTTCCAAGACTTTTTCAACCCTGGAACCATCAAT
ACCCTTGTTTTTCATGTTCACCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371867] SGN-U577517 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184481 [Download][View] Facility Assigned ID: FA0AAD18BA01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0136 Quality Trim Threshold: 14.5