EST details — SGN-E372073

Search information 
Request: 372073Match: SGN-E372073
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178988Clone name: TUS-30-J10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178988 is on microarray TOM1 spot ID 1-1-7.2.2.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78473 [cLES-5-M16] Trace: SGN-T98274 EST: SGN-E285791 Direction: 5' Facility: TIGR
Clone: SGN-C178988 [TUS-30-J10] Trace: SGN-T184866 EST: SGN-E372074 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372073Length: 697 bp (936 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372073 [] (trimmed) CCGGCAGTAATGTTTTTTTTACTAAAACAGCAACACATTTAAACATGAAACCTATTATCAGAATCTAAAAGGCCAAAAGAAATTGCAAATTGAGA
CATATTTGTTTAAACCAAGGACAAAGTTTAACATCCAAATTTCAAATCGCGGGGAAGTCTTAAATAGGCATCATCCTTGTGCATCTCATAATGAT
GCTATCATAAACTTTTCAAAAGTCATCATCATCCTCTTCAGCTATGTGTTGAGCAAGTTCTTGTTCTTGCTGTTGTCTCTCTCTCCTCTTCTCAG
CACTTTCTTTCTCCTTGTGGGAGTTTGGAGGAAATCGAAGAGCACGGACAGCCTCATTATGCATGTTAAGACAGAAAGCAATTCTCGAGTTGAAA
GCAATTTGAGGCTCATTTGTGGAGTAAATATCTCCAGTTTCCTTTGATACCATCCATCCGTTAGCATGATCCAACGTGGCATCAATTGCACCATC
TCGAATTGCTTTAGACACAATACTCTCAGCATCAGCAACAGGGTTTGGAGAATCCAGCCTCAGCTTTTTAGCAACATCAGTCAGTGAGATCCGAG
AGTATGAGATGCTGATGTTGCGTAACCCAGTCCTAATGACATTATGCCGAAGTCGCACAATCAAATTGTTGGTTCGGTCTGAACCAAAAGTGCTG
GAAAACTTCTCAGCAACATTCTTAAATAACTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372073] SGN-U577834 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184865 [Download][View] Facility Assigned ID: FA0AAD18DE05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5