EST details — SGN-E372117

Search information 
Request: 372117Match: SGN-E372117
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178794Clone name: TUS-30-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178794 is on microarray TOM1 spot ID 1-1-1.2.3.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70708 [cLER-15-K2] Trace: SGN-T95345 EST: SGN-E282825 Direction: 5' Facility: TIGR
Clone: SGN-C178794 [TUS-30-B8] Trace: SGN-T184908 EST: SGN-E372116 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372117Length: 766 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372117 [] (trimmed) TAGCTTAGTCTTATATCTTGTCAGGATACCGAGGCGAGATCCCTCATTCGAGGTACACACAGCCAATGTGACATATTTCTGCTAGTTTACACAAT
TACAGAGTGCCATAACAGACGTTTGACGATACAGGCTTCTGCGGTGCATATATTTGTTTATATAGATGTGTATATATATACGTATCTGTGTATCG
AAGCTGAAACTACACCATATCATAAGCATCTTCTCCGCCTTGTTCATTCTCATCCCACCTGGACCCAGCCCTAAATTTGCAGACAGGGCAAGTTC
CCCGCTGCCGTAGCCATGGGTCAATACAGTTTGCATGGAACTGATGTAAGCAAGGCAAGCTACGAATGAGTTCACCATCACTGACTTGCTCCAAG
CAGACACTGCAAGTTAGTTCGTCATCTGAGTTCTTTGTACCTCCTACAGCATTTGCAGGTTCTTGCTTCTTCTCAGTGGACCCTGAAGAAGATGT
TGGGTGTGTTGATGTACCAGCACTTTGTGGTCCAGAAACCTTATACTTGTGAACAGGAAGGGCATTTATCTCTTCCTCAGTCATTGATGGGGTTG
TAGGAGCATCATCAGAATCCAGTGCCCTCAACGTTTCATAATCTAAGTCATCAAACTCTCTATCAAGAAGTGCAAGCTGTAGTCTGAGGCCTCGC
AACCGTCCTCTGTTTGCAAGTGCTATTGATGGGGGCATATGCAGCCGCAACTCTGTAAGAAAACTCAAATTCCAAAGAAAAACAAACCCACTTTT
TTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372117] SGN-U568130 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184909 [Download][View] Facility Assigned ID: FA0AAD18DA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0081 Quality Trim Threshold: 14.5