EST details — SGN-E372139

Search information 
Request: 372139Match: SGN-E372139
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178894Clone name: TUS-30-F12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178894 is on microarray TOM1 spot ID 1-1-5.2.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71336 [cLER-17-I9] Trace: SGN-T95963 EST: SGN-E283112 Direction: 5' Facility: TIGR
Clone: SGN-C178894 [TUS-30-F12] Trace: SGN-T1515 EST: SGN-E378181 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178894 [TUS-30-F12] Trace: SGN-T184932 EST: SGN-E372140 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372139Length: 726 bp (927 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372139 [] (trimmed) AAAATTTCCAGATATATACACACCCAGAATACATAGCTGATCCAGGTTCATATTATACAGCAAAGTTCTACAGTAATTTATCTCATTTGCTAACT
AGTATCTGGCAGAATAGATACGTTATGTACATGTGTGGGAAGACTGAAAGATCATATTCCCAGAAGCAAGTAGAAGAGCCTTATGTACATGTTAC
CGAACAATATATAAAATCACCACTTGCTTAAAGGCTCCCAAATAGTTTCTTATCATCAGATCACACCTGAAGCAAGTGAAGAGTGGCTCAAACAC
TTCCCAGACGAATCAAATGGTACATGCTGCTTTCTATATATTAACACCTCTCATACACAGCACCATCATGTCTGCCCATCCCATTAAGATAGGAG
ATGTGTTACTCATTTAACCTGTACACTTTGTTCTAATAGCCAGCCAAATCAGATCATTAGTTAGTTTCACCTTGAAAAATGACCTCCAATATTTC
ATCATAACCCTTTTAGACAGAGAGGTAAAATTATGATATTAATCATACAGTGCATCTAGTAGAAATGTGAAAAGCCGAAGTGAGTTCCACAAGAA
AAGGCCTCATAACCGTGAACGGCGGAAGATTTTGATGGCATTTAGAGGTGAATCCTTACGCACTGAGGAAAATGGTTGGCCTTTTAAGGAAGAAG
TACACTTAACATCCCAACCTTCAACATTCTTAGGAACACAAGCATCAAAAAGGATTTGGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372139] SGN-U569772 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184931 [Download][View] Facility Assigned ID: FA0AAD18DC06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5