EST details — SGN-E372215

Search information 
Request: 372215Match: SGN-E372215
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178839Clone name: TUS-30-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178839 is on microarray TOM1 spot ID 1-1-4.4.3.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70813 [cLER-15-P4] Trace: SGN-T95273 EST: SGN-E282753 Direction: 5' Facility: TIGR
Clone: SGN-C178839 [TUS-30-D5] Trace: SGN-T184656 EST: SGN-E372216 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372215Length: 734 bp (923 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372215 [] (trimmed) AAAAGCAACCAAAATCTTCAATTGATGTAAAGCAAGTTTTACAAATTTCCAGACTTAAGACTTTATTCCCACAAGATGATACACTGCTAGTCATC
TCCAAAAGATTAGCTAGACAGTGCTTTCTGAAGTAACAAAATAACCTCGCCAACAATGGCGTTAAAAGATTCATGATCCTTCCTCCTCTTTCCAG
ACCGAAACAGTTATCTGAGAAACGTAGCTACTAAATAATCAGTGCTGTGTTTCATTGCTGACTCAACTGTCGAATGACGTATGGGAGGATACCAC
CATGGTTGAAGTAAGCCAACTCCACCTCAGTGTCAAAGCGCACTACGCATGTGAAAGATTTTCCAGTGTCTGTTTGTACAGTAACATCTTGACCT
GGGCGGATCTCGCTAATGTTGTCTGGGAGATCAATGGTATATCGCTCATGACCTGTCAATCCAAGTGAATCTGCATCTTCACCAGCCTTGAAACA
TAGAGGCACAATTCCCATTCCTACCAAGTTGCTACGGTGAATCCTCTCGAAGCTTTTAGCAATTACAGCTTTAACTCCCAACAACATGGGGCCCT
TAGCAGCCCAATCTCGGGAGCTACCACTTCCGTATTCAGCTCCAGCCAAGATTATTGTGTCTTGCCCAGCAGACTTGTATTTCATTGCAGCATCA
AACACGGAGAGCTTCTCTCCAGAGGGAATGTGAATCGTCTTTGGGCCAACTTCACCATTAACAGCTTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372215] SGN-U580991 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184655 [Download][View] Facility Assigned ID: FA0AAD18CB03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5