EST details — SGN-E372245

Search information 
Request: 372245Match: SGN-E372245
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178947Clone name: TUS-30-H17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178947 is on microarray TOM1 spot ID 1-1-8.4.2.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78309 [cLES-5-E16] Trace: SGN-T98256 EST: SGN-E285773 Direction: 5' Facility: TIGR
Clone: SGN-C178947 [TUS-30-H17] Trace: SGN-T1516 EST: SGN-E378550 Direction: 5' Facility: Giov. Lab
Clone: SGN-C178947 [TUS-30-H17] Trace: SGN-T184686 EST: SGN-E372246 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372245Length: 742 bp (905 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372245 [] (trimmed) GGAGGTGAAAGGCTCCTGTGTCGTTCTGGAAGAGGACTTTCTGCTGCACCATATCTAGGACTACCTATTTCTTCAGGTTTAGACCTTGGGCTTGG
GCTACGGCTACGGCCACGATAATCATCTGGGCTATATTTCCCTCTCCTCCCCACCCTAGGGGGACTAGGGCCAGATTCCAGAAGTCCTTCCTCTG
GTGGACTGTGCACCTCACCATTTTCAGAACCGGCTCTCAACCTACGAGGGTTTGGACTATGGCCATTTCCATGATCAGGGTTCCTCTCCTTTCTC
ATGTTTGGACTACGGCCACTGCCATACTCAGAATCCCTTTCCCTATGATTGGGATTAGGACTAGGTCGACGACCATAATCAGGGCTTGACCTACC
TTGACGGATCGGACTTGGGCTACGGGCCCGCCCACGACCATAATCAGGACTCCCCCTCTCTCTTCCATAAGGACTCCGAGATCGGCCTCGGTCAT
AACCTCTCTTAAGACCCCTATCTCGGTTTCTATCAGGGCTAAACCCATTTCTCCTGTCATCATCATCTTTATTTGCATATTCAACTGTAATGACT
TGATCCATCAGTTTACTCATGTTTGTAGCATCCAAGGCTCTAGTAGCATCCTCCTGAGTTTCATATTGAACAAATGCAAAATTTCTTCTAATCCT
TATATTGAGTATTTTTCCATATGGATCAAAGTGCCTCTCTATATCCCTGCTCCTAGTACTATATGGATCAAAATTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372245] SGN-U565752 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184685 [Download][View] Facility Assigned ID: FA0AAD18CD09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5