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EST details — SGN-E372334

Search information 
Request: 372334Match: SGN-E372334
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178951Clone name: TUS-30-H21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178951 is on microarray TOM1 spot ID 1-1-4.4.2.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78332 [cLES-5-F20] Trace: SGN-T98330 EST: SGN-E285847 Direction: 5' Facility: TIGR
Clone: SGN-C178951 [TUS-30-H21] Trace: SGN-T184773 EST: SGN-E372333 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372334Length: 652 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372334 [] (trimmed) TTTTGCATCTCAGTTCCAGGAGAGTAATGTCTATGTGAGTGGACAACAGAGTGAAAGCTCAGGTGTGTGGATTAATGCGCACAATAGAGATTTAT
CTAGTTTGCAAGCAAGTTCGTTTTATAATCTTCCTCAGGGTCAAGTGGCTCTAACACCCACTCAACCAGGTCATGGAACTTTTGCTGGTGTTTAT
CACCCAGCTCAACCAGTTACAGCATCAACTGTTCATCCACTTCTGCAGCAGTCCCAAACAATAGCTGGTCCAGTTGATATGGTTGGACCAACCGG
CAATGTTTATCAACGGCCTCAGCATGCACAGATGAACTGGCCAAGTAGTTATTGAGGAGCTATTCTTTTGTTCGCAAAGCATAAAACAAGAAGAG
AAAATTGTCATTGGAGTTTTTAGAGTTGCAACATGTTTTGATGTGGAGGAATGGTTCCAGCAAATGTTGGGAAGAAGTGTGCAGTCTAACTGTAA
ATTAAGAAGGGTGTGACATAGAAGAGAACTTCACCAAAGGTCTCTTCTTTGCTTGGACTGAGGATTTAAATGGTGAATCCTCCTGTAACTGATAG
TGGCAGATTTTAGTTGAGGCAGTTATATGCCGATTGGTTTTGTTTACGACTTTATAGCCTTATATAGTTTGAACATTTTGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372334] SGN-U584970 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184774 [Download][View] Facility Assigned ID: FA0AAD18CD11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5