EST details — SGN-E372369

Search information 
Request: 372369Match: SGN-E372369
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179097Clone name: TUS-30-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179097 is on microarray TOM1 spot ID 1-1-2.2.2.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78792 [cLES-6-M18] Trace: SGN-T98595 EST: SGN-E287143 Direction: 5' Facility: TIGR
Clone: SGN-C179097 [TUS-30-N23] Trace: SGN-T184808 EST: SGN-E372368 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372369Length: 660 bp (890 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372369 [] (trimmed) TCTGTGAATGCAATGGTCTCAAAGAAGTTGCTAACTACTGGAAACAAGTGATTCAGGTGAATGACTACCAAAAGAATCGGTTTGTTAACCGAGTT
GTCTCCTCTATGTTCAACACAGTTTCAGGCGAGAAGATTGCTATCCTTGGATTTGCTTTCAAGAAAGATACAGGTGACACTAGAGAGACACCAGC
AATTGATGTGTGCAAAGGCCTATTGGGAGACAATGCTAACTTGAGCATATATGATCCACAGGTCACTGAGGATCAAATCCGAAAGGATCTGTCAA
TGAAAAAGTTTGATTGGGATAATCCAATTCACCTCCAGCCAATGAGCCCCACTGTGATGAAGCAACTCAATGTAGTATGGGATGCTTATGCAGCC
ACAAAAGGCGCCCACGGCCTCTGTCTTTTGACCGAGTGGGATGAGTTCAAGACTCTTGATTTCAAGAAGATTTATGATAACATGCAAAAACCTGC
ATTTGTGTTTGATGGAAGGAACATTGTTGATGAACAGAAGCTCAGAGAAATCGGGTTCATCGTCTACTCCATTGGGAAACCTTTAGATGGATGGC
TCAAGGATATGCCTGCTGTGGCATAACCCCCCTGGATTAAGCACTGAACATGAGAGCAAAATCTATTTATATTTTTCCAGTTCTTGTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372369] SGN-U563101 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184809 [Download][View] Facility Assigned ID: FA0AAD18CG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0085 Quality Trim Threshold: 12.5