EST details — SGN-E372372

Search information 
Request: 372372Match: SGN-E372372
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179129Clone name: TUS-30-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179129 is on microarray TOM1 spot ID 1-1-2.4.3.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76449 [cLES-18-B14] Trace: SGN-T101610 EST: SGN-E289168 Direction: 5' Facility: TIGR
Clone: SGN-C179129 [TUS-30-P7] Trace: SGN-T184813 EST: SGN-E372373 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372372Length: 700 bp (914 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372372 [] (trimmed) AATAATAATTATAGATGTTCAATATTTAATCCCTTAATATTTTAGATAGGAGTTTGACTTGATTCATATGTCAAACTTAAATTTTAACTTCTCGA
CGTCTCATATGAGAATTTTATTTAATACTAGCAACATGTCATAAGTATACATCATTTTAGTAAGGACGTTGTCCGATCCAGTTGCCTACAGGATC
ATAGTTGCAAGAAATGAACCACCATCCGTTGTTGCAACGTGCCCGACCACAACCTAGTCGGACTGAGTTGCGCCAGACTACTTGAGTATAATGTC
TACACTTTTTTCCACCAACACATTGGTTGGTAGCGTAGTTATAGCTTGGCCTCTCGGACACCCACAATTGCACGGCTGCCCTCCCCGTGAAGTCA
CCACCACCCTTGGCAAGATTCTCCCCAGCACCAGAATGAATCAAGTTACAATCACCAGCTCTTGAGTTGGCATAGTTTTGTGCTCGGGATGCCAA
GTTGGCATCCCAAGACATAGGCCCGACTCCGACTTGGGCACGGGCATCGTTATGAACCGCAAGATAGTCTTGGGGTGAATTTTGGGCCTCACAAG
AGTGAAATATGGCTAATACCATGAGACAAGTGAGTAACAATGAGATGTTGAACAACCCCATTTTTCTTTAGGTTTAGTGGAGAGACGAGTTTTTT
TTTTTTTTTTTGTAATACCATAGGCAATAACAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372372] SGN-U579545 Tomato 200607 Build 2 213 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184812 [Download][View] Facility Assigned ID: FA0AAD18CH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5