EST details — SGN-E372642

Search information 
Request: 372642Match: SGN-E372642
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179207Clone name: TUS-31-C13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179207 is on microarray TOM1 spot ID 1-1-4.3.2.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76686 [cLES-18-M9] Trace: SGN-T101676 EST: SGN-E289234 Direction: 5' Facility: TIGR
Clone: SGN-C179207 [TUS-31-C13] Trace: SGN-T185100 EST: SGN-E372643 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372642Length: 741 bp (910 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372642 [] (trimmed) AAGCAATAAGAACTATTTTCCTTCCTGATACATAAGACTATAACAGAACAATTCATGTTCAGACAAGCTACATTTTCAGTTGATGGAATTTGACA
CGACAAGGACGACCAATAGTTCCTCGTTTTCCATCCAAGATGACTCTGAAATGCCACAAATCTAACATCAAAGGTTTGATATTTCTTTATGATCT
AAGTCAAATGAGAGGACACGCCATGGCCCCTCGAGATATTGTCTATGAAAAGAATACCATGGTACTTTTAGCTCTTTCACGAGCCAACTCCGTTC
TACTCAAGGATTTCATGTTCCAAGCGTCAATATATTACTATTCCATAGTCTACCGATGGTGTTTTGAACCTACAAAGGCTTATTCATCCAATTTA
GAGCGCTTCAAAGGAGGTGAATCAGATGTGCTGGTTATATTTGTCTCAGGATCTCCAAGAACTTCTATTTCCCGCTCTTTCTGTTTCTCGTGATC
AACTTCTTTAGCAGTGTCAACCTGTGACAACTGTGCAAAGGCATCATCTGCTGTAGAAGATGATGAGCCTTTAGCCAAGTCTGCGCCAGGCATTG
ACTTGCACTGCTTCTCAAACATCATCTGGAGGTATCGCCCTTGTTCTTCTATACGAAGCTGCAGGTTTCTTTGAATCTCAAGCTGTTCATGGAGA
CGCTTCTGCACTTCCATCTGCAATCGTAATGCCTCAGTGATCTCAATTCCCGTCTTTAAGTCCAGAAATGCCAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372642] SGN-U566905 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185099 [Download][View] Facility Assigned ID: FA0AAD19AB07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5