EST details — SGN-E372680

Search information 
Request: 372680Match: SGN-E372680
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179387Clone name: TUS-31-K1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179387 is on microarray TOM1 spot ID 1-1-8.3.2.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82159 [cLET-1-B22] Trace: SGN-T102496 EST: SGN-E292222 Direction: 5' Facility: TIGR
Clone: SGN-C179387 [TUS-31-K1] Trace: SGN-T185138 EST: SGN-E372681 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372680Length: 681 bp (882 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372680 [] (trimmed) AATGGATTATTACTTATACTTGATAATATACAGGAAGATAGTTGTCTCATTACTTATCCAATTGGGTCATAAAAAGTTGAAACCTTGTAGTAACT
TATAACAAAATCAAAAACGAAGAAATGATCCACAAAGTCTAAGATCTGTCTATGATTCAAGCTGGGCATACCAAATACCCTGGATTTTTACATCC
TTAGGAGTCTTTGCCCCCAGATCAGTATCAAATGGCTGAATGCTCTCAAACACTCCAATCACCTCACCAGTCTGTGGGTTGCTCTTGGTAACAGT
AAATGTGATCTTTCCTGTTAAAGACGCGGTATTCTTTACGTTCTTTTTCTGGAGCTCCTCCTCATCTCCTCTGCCTCCAGCTGGCAATGCAACAG
CATTGTCGTAACCAGTGGATCCACCCCTGCCTTTTGGGTCAAGAAACGATGAACCTCTGTAGGATGGCACAAGGAAGTCGCCACTGAAGCTCTCA
GGCTTTCCAGATGCCACAAGTTGTTTGATGGTGAAGAGGAACGGAACACGCTCACCACCAGGAAGCTGGACAGTAACAGCAGCGTAATCAATTCC
ATCCTTCTCCTCAAATTTAACAGTGCCATCAGGAGATACTTCAAACGGTCCCTCAATCTCATCCAAAGTGTAGGTTAAGCGAGTCATAAGCTTGG
TCTTTTGGAAGTCTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372680] SGN-U580345 Tomato 200607 Build 2 207 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185137 [Download][View] Facility Assigned ID: FA0AAD19AF01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5