EST details — SGN-C37273
| Search information |
| Request: 37273 | Match: SGN-C37273 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37273 | Clone name: cLEG-41-J13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177356 is on microarray TOM1: SGN-S1-1-7.2.7.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177356 [TUS-26-F10] | Trace: SGN-T182638 | EST: SGN-E370024 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177356 [TUS-26-F10] | Trace: SGN-T182639 | EST: SGN-E370025 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259104 | Length: 495 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259104 [] (trimmed)
CATCAAAGCTTTTTCATTCAATGGCCGGAAAAAGTAAGATTTTGTTCATTGGAGGTACTGGTTACATCGGAAAGTTCATCGTTGAAGCTAGTGCT
AAAGCTGGTCACAACACGTTTGTCTTGGTCACGGAATCAACTTCCAATCCTACCAAAGCCAAACTCATCGATACGTTCAAGAGTTTTGGTGTCAC
CTTCCTCCATGGTGATTTATATAATCATGTGAGTTTAGTGAATGCAATAAAGCAAGTGGATGTTGTGATTTCTATTGTAGGTCATGACCTTTTAG
CTGATCAAGTCAACATCATTGCTGCTATCAAGGAAGCTGGCAATGTCAAGAGATTCTTTCCCTCTGAATTTGGGAATGATGTAGATCGTCTCCAT
ACCGTTGAGCCTGCTAAAAAATTATTTAATGCTAAAGCTCAAATTCGCCGCGCTGTTGAAGCTGAAGGAATACCATTCACTTATGTCGTCAACTT
CTTTTGTGCTGATTTTTTTC
AAAGCTGGTCACAACACGTTTGTCTTGGTCACGGAATCAACTTCCAATCCTACCAAAGCCAAACTCATCGATACGTTCAAGAGTTTTGGTGTCAC
CTTCCTCCATGGTGATTTATATAATCATGTGAGTTTAGTGAATGCAATAAAGCAAGTGGATGTTGTGATTTCTATTGTAGGTCATGACCTTTTAG
CTGATCAAGTCAACATCATTGCTGCTATCAAGGAAGCTGGCAATGTCAAGAGATTCTTTCCCTCTGAATTTGGGAATGATGTAGATCGTCTCCAT
ACCGTTGAGCCTGCTAAAAAATTATTTAATGCTAAAGCTCAAATTCGCCGCGCTGTTGAAGCTGAAGGAATACCATTCACTTATGTCGTCAACTT
CTTTTGTGCTGATTTTTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259104] | SGN-U574146 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72136 [Download][View] | Facility Assigned ID: TBFGG55TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
