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EST details — SGN-E372830

Search information 
Request: 372830Match: SGN-E372830
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179702Clone name: TUS-32-H4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179702 is on microarray TOM1 spot ID 1-1-5.4.1.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179702 [TUS-32-H4] Trace: SGN-T186312 EST: SGN-E372831 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372830Length: 653 bp (875 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372830 [] (trimmed) AAACCTAAAACAGCAACATTAGATGTAATATTATCCACAGTAAAATCACAGCAATTACATATTAATGAAAATGCCAAAAAATATTTTGAAAAGAT
AACATGGAATACAACTTAAACTTAATAGTACAATACAAGGATAACATTTATTGCGCCAAAGCACTTGTGTTGTAAACAAGGAAAGCACCTCCTGC
AAAAATGCCAAGCAAGGGCACCGCCCATATGGCTAAGCCAGGGGTACCTCCAACATAAACATCACCACTTGGAGACCATTCATCCGTGTTGTAAA
TGGGACTGTATCCATCAACATTAGCTCCATATTTGTCAACATATTGGTACACACCCTTTCCCTTGGGCTTCCTGCCTGAGGCATCAACCCCATTT
TTCAAGGCCATGCTTCCATTAATTCCATAGGGTTTGTCAGTCTTAAGCTTTTTAACACCACTAGCCACAACTTTGAAGGAAAAAAAAAATCTAGT
AAGTGATGGAAGCCCTTTCACTGATATTTTCTCCAAAGTGAAAGTTGGCTTTAGGCTCAATGAGCTCATTACTGGGCTTGCCATCATCCTCATCC
AAATAGTTTACGCCATGATGATTTGGATATTTCATCCTTCAGGGGCTTGTATGAGACTGTGCACAATATTATTCTAATTGACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372830] SGN-U581090 Tomato 200607 Build 2 465 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186311 [Download][View] Facility Assigned ID: FA0AAD20DD02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0127 Quality Trim Threshold: 12.5