EST details — SGN-E372945

Search information 
Request: 372945Match: SGN-E372945
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179855Clone name: TUS-32-N13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179855 is on microarray TOM1 spot ID 1-1-4.2.1.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86768 [cLET-44-D24] Trace: SGN-T111497 EST: SGN-E298861 Direction: 5' Facility: TIGR
Clone: SGN-C179855 [TUS-32-N13] Trace: SGN-T186099 EST: SGN-E372946 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372945Length: 651 bp (917 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372945 [] (trimmed) CATCATTAAAATAAAAGCCAATAATTATACTCTGAAAAGGTAAACGTTCAGAGCGGTAACAACTTATATAATGGTTCAGAACTAGATAGAAGATC
AAGACACAAAATTTCATTCAGCGGAAGTAGAAAGCTAAAGGTACAGATTTGTAAATTCTGCAACTTCAATTTGCAGCTTCTAGAAAAGCTCTTCC
AGGTTGACGTGCAGCAAGTCGTCCATGGCAGCCAAGAAGCTTGGCGTTCACACCGTCTGGGACAATACGATTCTCGGATTTGTATTTCAGATAAT
CGGTACGGCTGAACTTAGTGAACCCCCACTTTCTGCTGACAATAATCTTTTGTCGGCCAGGAAACTTAAACTTAGCACGGCGAAGAGCCTCTTGA
GCATGGTTAGCATTGCCATCTTTGCACCGAACCGAGAGAAGAACCTGACCAATAGCAACACGGGCACAGACTCCCTGTGGCTTACCGAAAGCTCC
TCTCATACCAGTTTGGAGCCTATCAGCCCCAGCACATGACAACATCTTGTTAATTCGCAAAACATGGAAGGGATGGACCCTAACCCTGAGGTGGA
AAGCATCCTTTCCTGCAGACTTGGTCATGTACTTGTTGCAAGCAATACGAGCAGCTTTAAGTGCCCTACTTGAACATTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372945] SGN-U578637 Tomato 200607 Build 2 198 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186098 [Download][View] Facility Assigned ID: FA0AAD20CG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0156 Quality Trim Threshold: 14.5