EST details — SGN-E373020

Search information 
Request: 373020Match: SGN-E373020
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179813Clone name: TUS-32-L19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179813 is on microarray TOM1 spot ID 1-1-6.4.1.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80878 [cLET-13-K19] Trace: SGN-T105735 EST: SGN-E293892 Direction: 5' Facility: TIGR
Clone: SGN-C179813 [TUS-32-L19] Trace: SGN-T1556 EST: SGN-E378560 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179813 [TUS-32-L19] Trace: SGN-T186172 EST: SGN-E373019 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373020Length: 658 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373020 [] (trimmed) CAAAAGCACGCAAAAAATCTTTGGTTACAGTTCCAATGGATCTTCAGATTCCTCACAGTTTTGAAAAAGTAGTCGTTCACACATTGAGTCACAAT
TTTCGTAGTGCTACCAGAATAGTGCGCACTGAATTGAGGTTGCCTCTCAAGCCAGATCACGTTCTATTAAAAGTCATCTATGCTGGTGTGAATGC
TAGTGATGTCAACTTCAGCTCAGGGAGGTATTTCAGTGGAAATGGCAAAGATATCACCTCCCTCCTTCCACTGGATTCTGGCTTCGAGGCTGTGG
GAGTAATTGCTGCACTCGGTGATGGTGTTAGAAATTTAAAGATTGGCGTGCCTGCTGCCATCATGACTTTTGGCGGTTATGCTGAATTTGTCATG
GTCCCCACCAAACACATCCTTCCTGTAGAAAAACCAGATCCAGAAGTACTTGCAATGCTTACCTCTGGACTCACCGCATCAATTGCTTTGGAAAA
GGCTGCTCAAATGGAGTCGGGAAAAGTTGTCCTTGTGACTGCCGCTGCAGGAGCGACAGGACAATTTGCAGTGCAGCTTGCAAAATTAGCTGGAA
ACACTGTAGTTGCAACTTGTGGAGGTTACGAAAAGGCCAAGCTTCTTAAGGATTTGGGAGTTGATCGGGTCATTGACTACAAAGTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373020] SGN-U579812 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186173 [Download][View] Facility Assigned ID: FA0AAD20CF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5