EST details — SGN-E373216

Search information 
Request: 373216Match: SGN-E373216
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179179Clone name: TUS-31-B9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179179 is on microarray TOM1 spot ID 1-1-8.2.2.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76607 [cLES-18-J10] Trace: SGN-T101627 EST: SGN-E289185 Direction: 5' Facility: TIGR
Clone: SGN-C179179 [TUS-31-B9] Trace: SGN-T185355 EST: SGN-E373217 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373216Length: 647 bp (927 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373216 [] (trimmed) GACCAAACCACAACCATACATAATTCAGACCATCTCCAACAAACTGTCTATTTTATTTGTCTTTTCCATTTGCTGCCCAAAATGCAAGCATCTGA
GCAAGCTAGCAAAGAAAAAAATTCTCAATCCCCAGAACCTAAAACATCATCCACAGAGTTGAAATTTATGTCAGCTAATGACTTATTTGAATTAG
AACATCCTTTGCCCTCAACCAAAGAGAGTAAAACAAGGAGATGCCCTTTTCACAAAGCGAGCTCCATGCTTCTCTAGGGAAGGCTGCAATCCAGC
TTAAAATTCACTAGTATGGCCTGTAGCGGATGGACCGTCTGAACCTTGGAACCCTTCCAAATGGTGGAATGGCTGGAGCACCAGGCACAAACGCA
CGTCGAGGGCGGAATCCAGCATAAGGATTAAATCGCCTTCCTCGAAATTGCTTCATACCAGGAACATTTGTCCGCTTGGCAGACACCTTCAACTT
CCGCCCGTGAAGCTCTGATTCGTTTAACAGAAGTGCATTTTGAACAGCCTCCCTTTCAAAGAACTCCACATACGCAAAGCCTTTCGGCTGGCCAA
GCTTGTCAGTCAGGATAGTTACCATTACCAACATATATGGATCGCGAATCCACCTCCTCCTTTTCAGCCTGAGTAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373216] SGN-U582601 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185354 [Download][View] Facility Assigned ID: FA0AAD19CA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0003 Quality Trim Threshold: 12.5