EST details — SGN-E373556

Search information 
Request: 373556Match: SGN-E373556
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179510Clone name: TUS-31-P4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179510 is on microarray TOM1 spot ID 1-1-5.4.2.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82336 [cLET-1-K12] Trace: SGN-T102443 EST: SGN-E292169 Direction: 5' Facility: TIGR
Clone: SGN-C179510 [TUS-31-P4] Trace: SGN-T185695 EST: SGN-E373557 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373556Length: 673 bp (883 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373556 [] (trimmed) GTATTGATATGAATAATGCTTTCTTAGCTAATGTTTTTGGTTTTACAATTCAAAAGTATTATAGTAAATCTAAAAGGTGATTGATAGAACCAAAT
AGAATTACAAAAGCTTAAACAACAAAAAAAAAAAAATATCAAACATGTTCTGGTATTTGATACTTAACAGTTGAAGAAAGTGAAGCTACAGCTTC
TTCAACTGTTAAAAAAAGAACATTTGGTCTCATCAAATCTTTGGTTTCATCAGCCCTTTGTAGTTTTTCCATTACTTCACCTATTGGATTCACCA
ACACAAACTCAAGTCCTTTCTTTTCCAATGCCATACTTAAATCCTTGAACAATGAGATTCCACTTGTATCAATAGAACTCACAGGAGACAAATCG
AGGACTACAACTCTAAGCCCCGGTTGTTTCTTGGCTCCTTCCTCCTCGTAGTCTTGTATCCATCTCGAAATCCTTTCTTTAAGATAAGTAACATT
AGCAAAGTTGATTGGAGCTTCAATACTTAAAATGAGAAAACCAGCAACACTCAAAGCTTCTTCATAGTGATCAACATTTCTATAAATACCAGTAC
CAGGTATGTTCCCTAACATAACTGTTTTTGGCCTTGTAATTTGCATTAACACCTTTAACATTGATATGCCAATTGCATTAGCAAGACCATCTTGA
ACAGAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373556] SGN-U582421 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185694 [Download][View] Facility Assigned ID: FA0AAD19DH02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0108 Quality Trim Threshold: 12.5