EST details — SGN-E373800

Search information 
Request: 373800Match: SGN-E373800
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179450Clone name: TUS-31-M16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179450 is on microarray TOM1 spot ID 1-1-1.1.2.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82261 [cLET-1-G23] Trace: SGN-T102568 EST: SGN-E292294 Direction: 5' Facility: TIGR
Clone: SGN-C179450 [TUS-31-M16] Trace: SGN-T185243 EST: SGN-E373801 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373800Length: 619 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373800 [] (trimmed) GAAAACTGGAAATTTTCATTCATAATTAGCAGTTCATTACAAAAGGATAAGCTAAGAGCAAGCTAATTGAACTAATTTTACATCCACAAAATACT
AATTTCAAACTTTAACAGTAGTACACAGAACCTAAAAAATTTTAAGAGCTAGTGAATTTGGTAACAGCCTTAGTTCCTTCAGAAACAGCATGTTT
AGCTAATTCACCAGGAAGAACAAGACGAACGGCAGTTTGAATTTCACGAGAAGTGATGGTAGGCTTTTTGTTGTAACGAGCAAGACGAGAGGATT
CCTGTGCAAGTTTCTCGAAGATATCGTTGATGAAACTGTTCATTATACCCATAGCTTTGCTAGAAATACCGATATCTGGATGTACCTGCTTCAGC
ACCTTGAAGATGTAGATCTTGTAGGTTTCAACCGCCTTCTTAGATCTCTTCTTCTTTTTGTCTCCGGCAGCTGCACTGCTATCCTTTGGTAGCTT
CTTACCGGCCTTTGGCTTCTTCTCTGCCGGAGATTTCTCCGCTAAGGGAGTTTTTTCAGCTGCTGGCTTCTTCTCGGCGGGCTTTTTCTCAGCTT
TTGGTGCCATTGTAAGGAAGAAGAAAGGGGAACTTTACAGATGCTTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373800] SGN-U581577 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185242 [Download][View] Facility Assigned ID: FA0AAD19BG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0001 Quality Trim Threshold: 12.5