EST details — SGN-E373887

Search information 
Request: 373887Match: SGN-E373887
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179440Clone name: TUS-31-M6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179440 is on microarray TOM1 spot ID 1-1-3.1.2.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82243 [cLET-1-F24] Trace: SGN-T102508 EST: SGN-E292234 Direction: 5' Facility: TIGR
Clone: SGN-C179440 [TUS-31-M6] Trace: SGN-T185330 EST: SGN-E373888 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373887Length: 633 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373887 [] (trimmed) CAAGATTGAGCAAAATTAACATTTATACTATATATAATAGAAATTTTCTAACAGAGAAAGTATTTTTCAGCTTACATTTCAATTTACTTTCTGCA
AAGGGGAAACAAGATTTGAGGCTCCAAAAGCTGCAAAGCCACCAACAACAGAAAGTAAAGCAACCACAACTTGCAAACCGATTTGCCAAGGGTAA
TCTTCCGGCACCAGATACACACAAACAGGACCCACAGCCAACAATCCCAAACTCAAACTGAAAAGTGCTGATGGAGTTGAAGGGTCAGTAGCTGC
TGAAAGAATCCCCAATTCTTCGGCTTTTGAAAGAAGACCAAGTCTTTCAATTGTCGATAAAGAGAGTCCAGATTTCTCAGCAGCTGATAGTAAAC
CAGCTTTCTCTGCTTTAGTTAACAGTCGCAGTTGCTCCACTCTTGTCAATAACTTCACTGGTGGTGTAGACAAAAAATTGCCCGGCCTAGGTTTC
TCCCCTACTGGAAATACAGTTGTTGTCTTTTTACTAGTGGATGGAGTTGGTTTTTGCGTAGCCATGGATCGGATGAGAAGTGGTGCGTTTGAAGC
AGAGAAACGTGAAATCGCAACGGCGCCGTCCATCATCATCATCTTCTTCTTTTTCAGTGGTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373887] SGN-U578374 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185329 [Download][View] Facility Assigned ID: FA0AAD19BG03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0108 Quality Trim Threshold: 12.5