EST details — SGN-E374085

Search information 
Request: 374085Match: SGN-E374085
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179949Clone name: TUS-33-B11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86997 [cLET-44-P4] Trace: SGN-T111531 EST: SGN-E298895 Direction: 5' Facility: TIGR
Clone: SGN-C179949 [TUS-33-B11] Trace: SGN-T186698 EST: SGN-E374084 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374085Length: 703 bp (939 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374085 [] (trimmed) CTTTTTTTGAAACTTCACTATACAAATTATCTGGCATTTATTTTTCAAGTGTGTTTCTTCACTCAATCTTTTAGATTTTATTTTAAAATCGCGAT
TTTGTAAATGGAAGAAACAATGCACGTACCAGAAGTTGTACTCAACTGTGGCTACAAAATGCCTTTGTTAGGCATGGGAACTGCTGCGTATCCCA
TGCCGATAGATGACTTGACATCTATTTTGGTTGAGGCCATTGAGACAGGATACCGCCATTTTGACACCGCCGCGCTTTATGGGTCAGAGGAGGCC
GTGGGGAGAGCAGTGGCGGAAGCAATAGACCGAGGCATTATAAAGAGTCGCCAACAAGTGTTTATTACTTCTAAGTTATGGTGCACCCAGGCACA
CCCTCAATTTGTCCTTCCTGCTCTCAAAAACACACTTGGGAAATTGGGGCTAGAGTATGTTGACTTGTATTTAATACATTGGCCTGTAAGTATGA
AACCAGGACCAGTTGATATGCTCAAATTCAAAAAGGAAGATATTGTTCCTTTTGATATGAAAGGGGTATGGAAAGCAATGGAAGAGTGCTGCAGG
TTGGGCCTAGCAAAGTCTATTGGTGTCAGCAATTTCAGTTGTACCAAACTCTCACAACTCCTCCAAATTGCTAACATTCCTCCTGCAGTTAATCA
AGTAGAAATAAATGTGGCATGGCAGCAGCAAAAATTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374085] SGN-U588466 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186699 [Download][View] Facility Assigned ID: FA0AAD21CA06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5