EST details — SGN-C37438
| Search information |
| Request: 37438 | Match: SGN-C37438 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37438 | Clone name: cLEG-42-A9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177437 is on microarray TOM1: SGN-S1-1-6.1.6.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177437 [TUS-26-I19] | Trace: SGN-T182291 | EST: SGN-E368881 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177437 [TUS-26-I19] | Trace: SGN-T182292 | EST: SGN-E368882 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259439 | Length: 597 bp (928 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259439 [] (trimmed)
AGTCACAAGTTCCATAAATTGGGGGAGCTAAGGAGATCCCAGCATTTTCTCAAGTTGGATCTCCAAAGAGCCTTCTCCAATTTTTACCATTTCTT
GAAATGGTTCAATCACCTATGAGCAGAAAGCTAGTAAGAAATGGTGGCCTGTTTTATCCAGTTATTGGGTTTGCACTGTTTGTTACTTTTCTTTA
TTTGGCATTTGGAAACTTGTGGGGTTTCAATTTCAACAGAGAAGAAATAAAGTTAAGTTTTGTGGAGAGAAATGGAACTCAATTCTTTGTGGATG
GTAAAGCTTTTTATATAAATGGATGGAATTCTTACTGGTTAATGGACCATGCTGTGGATTATAGTAATAGACCAAGGATTAAAGGGATTTTACAA
GCTGGTGCTAAGATGGGGCTCAGTGTGTGTAGAACTTGGGCTTTTAATGATGGTGGATACAATGCTCTGCAGATTTCCCCTGGTAGATTTGATGA
AAGAGTGTTTAGAGCATTGGATCATGTTATTGCAGAAGCAAGAAAGAATGGCATTAGATTGATGCTTAGCTTGGTTAACAACCTGCACGCATTCG
GGGGGAAGACAGAGTATGTGAAGTGGG
GAAATGGTTCAATCACCTATGAGCAGAAAGCTAGTAAGAAATGGTGGCCTGTTTTATCCAGTTATTGGGTTTGCACTGTTTGTTACTTTTCTTTA
TTTGGCATTTGGAAACTTGTGGGGTTTCAATTTCAACAGAGAAGAAATAAAGTTAAGTTTTGTGGAGAGAAATGGAACTCAATTCTTTGTGGATG
GTAAAGCTTTTTATATAAATGGATGGAATTCTTACTGGTTAATGGACCATGCTGTGGATTATAGTAATAGACCAAGGATTAAAGGGATTTTACAA
GCTGGTGCTAAGATGGGGCTCAGTGTGTGTAGAACTTGGGCTTTTAATGATGGTGGATACAATGCTCTGCAGATTTCCCCTGGTAGATTTGATGA
AAGAGTGTTTAGAGCATTGGATCATGTTATTGCAGAAGCAAGAAAGAATGGCATTAGATTGATGCTTAGCTTGGTTAACAACCTGCACGCATTCG
GGGGGAAGACAGAGTATGTGAAGTGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259439] | SGN-U576195 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72200 [Download][View] | Facility Assigned ID: TBFGI05TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.940 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
