EST details — SGN-E374431

Search information 
Request: 374431Match: SGN-E374431
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181924Clone name: TUS-38-D18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181924 is on microarray TOM1 spot ID 1-1-7.4.10.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82783 [cLET-21-I5] Trace: SGN-T107788 EST: SGN-E293666 Direction: 5' Facility: TIGR
Clone: SGN-C181924 [TUS-38-D18] Trace: SGN-T187700 EST: SGN-E374430 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374431Length: 558 bp (893 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374431 [] (trimmed) GTAATCAATTATCCATCATGGCTGTTCACAAGGAAGTTAATTTTGTCGCTTACCTACTAATTGTTCTTGGAATGTTTCTATATGTTGATGCCAAG
GCTTGTACTAGAGAATGTGGTAATCTTGGGTTCGGGATATGCCCACGTTCAGAAGGAAGTCCGCTAAATCCCATATGCATCAATTGTTGCTCAGG
CTATAAGGGTTGTAATTATTATAATTCTTTCGGAAAATTTATTTGTGAAGGAGAATCTGATCCAAAAAGGCCAAATGCTTGCACCTTTAATTGTG
ATCCAAATATTGCCTATTCAAGATGTCCCCGTTCACAAGGAAAATCGTTAATTTATCCCACCGGATGTACCACATGTTGCACAGGGTACAAGGGT
TGCTATTATTTTGGTAAAGATGGAAAGTTTGTATGTGAAGGAGAGAGTGATGAACCCAAGGCAAATATGTACCCTGTAATGTGACTCTAGACTTG
TCCATCTTCTGGATTGCCCAAAATTAAGTAATTAATGTATGAAATAAAAGGATGCACACTTATATAATGACATGCTAATCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374431] SGN-U578366 Tomato 200607 Build 2 209 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187701 [Download][View] Facility Assigned ID: FA0AAD26DB09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5