EST details — SGN-E374475

Search information 
Request: 374475Match: SGN-E374475
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182200Clone name: TUS-38-P6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182200 is on microarray TOM1 spot ID 1-1-3.4.10.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C85844 [cLET-41-D1] Trace: SGN-T110565 EST: SGN-E298528 Direction: 5' Facility: TIGR
Clone: SGN-C182200 [TUS-38-P6] Trace: SGN-T187744 EST: SGN-E374474 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374475Length: 665 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374475 [] (trimmed) TTCACATCATATAATTTAATTACCAAGAAAAATTAAGATGGAGAACTTCCCAATTATCAACTTGGAAAATCTTAATGGAGATGAGAGAGCCAAAA
CCATGGAAATGATCAAAGATGCATGTGAGAATTGGGGCTTCTTTGAGTTGGTGAACCATGGGATTCCACATGAAGTAATGGACACTGTGGAGAAA
TTAACAAAGGGACATTACAAGAAGTGCATGGAACAGAGGTTTAAGGAACTAGTGGCAAGTAAGGGACTTGAGGCTGTTCAAGCTGAGGTTACTGA
TTTAGATTGGGAAAGCACTTTCTTCTTGCGCCATCTTCCTACTTCTAATATCTCTCAAGTACCCGATCTTGACGAAGAATACAGAGAGGTGATGA
GAGATTTTGCTAAAAGATTGGAGAAGTTGGCTGAGGAGTTACTTGACTTACTCTGTGAAAATCTTGGACTTGAAAAAGGTTATTTGAAAAATGCC
TTTTATGGATCAAAAGGTCCCAATTTCGGTACTAAAGTTAGCAACTATCCACCATGTCCTAAGCCCGATTTGATCAAGGGACTCCGCGCTCATAC
AGACGCTGGAGGCATCATACTTCTGTTCCAAGATGACAAAGTGAGTGGCCTTCAACTCCTCAAAGACGAGCAATGGATCGATGTTCCTCCCATGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374475] SGN-U578701 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187745 [Download][View] Facility Assigned ID: FA0AAD26DH03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5