EST details — SGN-E374674

Search information 
Request: 374674Match: SGN-E374674
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173369Clone name: TUS-15-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173369 is on microarray TOM1 spot ID 1-1-2.4.20.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2150 [cLEC-14-P24] Trace: SGN-T26537 EST: SGN-E204921 Direction: 5' Facility: TIGR
Clone: SGN-C173369 [TUS-15-P7] Trace: SGN-T188903 EST: SGN-E374673 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374674Length: 687 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374674 [] (trimmed) AATGTATTGCCTTCTATCTCACTTTTCCCCACCTACTTTGTAAAGAATCCTTGCAGAAGAACCTACAGTCATGCTGACCCAAGAAGGGGTCTTTT
CAAGATTTCTTGTTCTTCCACCTCAGAAAATCTTAACAAGGAGTCAGATGTAGTGGTGGTGGAGGAGAAAAGTGTTTCTGTGATTCTTCTTGCTG
GAGGAAAGGGGAAAAGAATGGGTGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGCCAGCCAATTGCATTGTACAGTTTCTACACTTTCTCC
AAGATGCCTCAGGTGAAGGAAATTATTGTTGTATGTGATCCTTCTTATCAAGACATTTTTGAAGATGCCAAAGAGTATATCCAAGTCGACTTAAA
ATTTGCATTGCCTGGGAAGGAAAGACAAGATTCTGTATACAGCGGACTTCAGGAAGTTGATTCAAACTCCAAACTCGCATGCATCCATGACTCTG
CAAGACCTCTTGTACAAATTGAAGATGTAGAAAAGGTCCTGAAGGATGGTTGGCTGGTTGGAGCAGCAGTTCTTGGTGTTCCTGCCAAAGCTACA
ATCAAAGAGGCAAACAGTGAATCTTTCGTTGTGAAGACTCTTGACAGGAAAACACTTTGGGAAATGCAGACACCTCAGATAATCAAACCTGAGTT
GCTTAAGAAGGGTTTCGAGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374674] SGN-U566797 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188904 [Download][View] Facility Assigned ID: FA0AAD3CH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5