EST details — SGN-E374688
| Search information |
| Request: 374688 | Match: SGN-E374688 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C172692 | Clone name: TUS-14-D2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C172692 is on microarray TOM1 spot ID 1-1-7.4.20.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C10811 [cLEC-6-F2] | Trace: SGN-T24031 | EST: SGN-E202370 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E374688 | Length: 309 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E374688 [] (trimmed)
GCAACCAAACTAAAGACTTGAAAAAAACCTTATTTTTTGTAATAGACTAATATTACAACCTTTTTTAATATATATCAACTTGGTGTGCATCATTA
TATGTACATAATATAGAGGAGGTGGATTCTAGAAAAACAACTTAGTGTCCGTGGCAGTTTTGAGGAATTCTTTGATGGATCAAAAATTTTCTTTA
TGGAAATCAAACTTGGTGGATGTCTTGTGTGAAAAATCCAATGCGTGTTGCTTTAACTCTTTCGTTAGTGCCGGTGCCCCACAGTAGAACACTCC
AACTTTATCCTCTGGGTGGTTGAG
TATGTACATAATATAGAGGAGGTGGATTCTAGAAAAACAACTTAGTGTCCGTGGCAGTTTTGAGGAATTCTTTGATGGATCAAAAATTTTCTTTA
TGGAAATCAAACTTGGTGGATGTCTTGTGTGAAAAATCCAATGCGTGTTGCTTTAACTCTTTCGTTAGTGCCGGTGCCCCACAGTAGAACACTCC
AACTTTATCCTCTGGGTGGTTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E374688] | SGN-U578140 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T187996 [Download][View] | Facility Assigned ID: FA0AAD2DB01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.901 | Expected Error Rate: 0.0138 | Quality Trim Threshold: 20.5 |
Working
