EST details — SGN-C37479
| Search information |
| Request: 37479 | Match: SGN-C37479 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37479 | Clone name: cLEG-42-D11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177456 is on microarray TOM1: SGN-S1-1-3.2.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177456 [TUS-26-J14] | Trace: SGN-T182659 | EST: SGN-E370045 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177456 [TUS-26-J14] | Trace: SGN-T182660 | EST: SGN-E370046 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259526 | Length: 575 bp (959 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259526 [] (trimmed)
GCTGCAGGTTTTTTTATGGAAAATTTATTTGAAAACTCTTGATATAATTTAGTTATGCATCTTTTTATTGGAGCACATACCAATTTTTAGAGCCA
AAATCATCAGCTAGGCAAGGAGGCAGAGCTTTTACCATCTTGGTACCACTTATAGTTCCTCTCTTGCATTAGATCTTTGAAGAAACTATCTATAG
TTTCTCTTGTAATACCTGGCATAATTACAACATGTGCCATGCCTCTTAAGCAACACAAGTTCCAACGACGAATGAATTTATGGTCACAAGGTCGT
TCAAAAACAACAGTAATACTAAAATCATTCAGCATAACACTAATTCCTGCTTCAAGAAGTCGATCTTTCAAATACCGAGCATTTTCAATGCATGT
TATGGAATCTTGTTGCAATCTAGCATGTCCTTTCTTGCTTAAACAGTACCATAAGAATATTGGTGTAAATCCATTTCGACTACCAGAAATTGTAG
CATCTGCGGAATTAATATACTCAATTTTTGAGAGGGTGCTAACGTAACTTCTCCTTGTTATCTGAACGCCACAAGACATTGGACATCCCAAGAAT
TTGTG
AAATCATCAGCTAGGCAAGGAGGCAGAGCTTTTACCATCTTGGTACCACTTATAGTTCCTCTCTTGCATTAGATCTTTGAAGAAACTATCTATAG
TTTCTCTTGTAATACCTGGCATAATTACAACATGTGCCATGCCTCTTAAGCAACACAAGTTCCAACGACGAATGAATTTATGGTCACAAGGTCGT
TCAAAAACAACAGTAATACTAAAATCATTCAGCATAACACTAATTCCTGCTTCAAGAAGTCGATCTTTCAAATACCGAGCATTTTCAATGCATGT
TATGGAATCTTGTTGCAATCTAGCATGTCCTTTCTTGCTTAAACAGTACCATAAGAATATTGGTGTAAATCCATTTCGACTACCAGAAATTGTAG
CATCTGCGGAATTAATATACTCAATTTTTGAGAGGGTGCTAACGTAACTTCTCCTTGTTATCTGAACGCCACAAGACATTGGACATCCCAAGAAT
TTGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259526] | SGN-U580826 | Tomato 200607 | Build 2 | 46 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72287 [Download][View] | Facility Assigned ID: TBFGK18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0033 | Quality Trim Threshold: 20.5 |
Working
