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EST details — SGN-E374853

Search information 
Request: 374853Match: SGN-E374853
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173151Clone name: TUS-15-G5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173151 is on microarray TOM1 spot ID 1-1-4.3.20.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1725 [cLEC-13-L13] Trace: SGN-T25989 EST: SGN-E204236 Direction: 5' Facility: TIGR
Clone: SGN-C173151 [TUS-15-G5] Trace: SGN-T188496 EST: SGN-E374852 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374853Length: 668 bp (884 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374853 [] (trimmed) CAGGTCAAACTGAGTACAACCTGTAGGCTGCAATAAGGTTCAAATTAGTGACTACCTGTTGGCTGAAATCTCACATTTAAATTTTAAAAGGGCAT
GAGCAATGGATATGGTGGCAATCGGTTTATAAGCTTACAAATTTTTTATATTTCCTCCTTATGCACACACTATTTATCAAGATTTCCAGTTGCAT
TTTCACCACTTCGATAGTTGTGCAAATTAAAATTGTTGAAAAACAAGTCAAGGTATGTTTAAGAGCTCACCTCGATGACTATGACAATCAAACAA
TACTTTATACGGCTATTTTGCAGAATATATTCTGGTGAGATCATGAGACTAATTTATATGCAATAACTAAAACGTATCTTCAGTAACATCGGAAG
GGAAGTAAAGGAGATCCACTGTTGATATGGTTCAACTTTATCTTTTGAGTCTTTTGATTGATGAAGTGCAGGATGATGCTTCTATTTCCTGGAGA
AAAAGAAAGAAACACTTCTTTGTCTTGAGTCACTCGGGAAAGCCAATATACTCGAGATATGGAGATGAACACAAGCTTGCTGGATTCTCTGCCAC
TTTGCAAGCCATCATTTCATTTGTTGAGAATGGGGGTGATAGAGTCAACTTGGTCAGAGCCGGGAAACATCAGGTTGTGTTTTCTTGTAAAGGAC
CTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374853] SGN-U573170 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188497 [Download][View] Facility Assigned ID: FA0AAD3AD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5