EST details — SGN-E374967

Search information 
Request: 374967Match: SGN-E374967
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173341Clone name: TUS-15-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173341 is on microarray TOM1 spot ID 1-1-6.3.20.16 [Order] [Tomato Microarray Database]
See unigene SGN-U562796 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C2088 [cLEC-14-M18] Trace: SGN-T26445 EST: SGN-E204829 Direction: 5' Facility: TIGR
Clone: SGN-C173341 [TUS-15-O3] Trace: SGN-T188610 EST: SGN-E374966 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374967Length: 718 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374967 [] (trimmed) CTTTTCTAAGTTCTCTCTTAGCTTCCCTTTTACTTGTTGGGCTTCTAATCCAAATAACAGGAGCGCAGCCTATCGGAGTATGTTATGGAAAAATT
GCCAATAATTTACCATCGGATCAAGATGTCATAAAATTATATAATTCGAATAACATCAAGAAAATGAGAATTTACTTTCCAGAAACAAATGTCTT
TAATGCCCTCAAAGGAAGTAACATTGAAATAATTCTTGATGTCCCAAATCAAGATCTTGAAGCCCTAGCCACTCCTTCAAACGCCAACGGTTGGG
TTCAAGATAATATAAGAAATCATTTTCCGGATGTTAAATTCAAATATATAGCCGTTGGAAACGAAGTTGATCCAGGTAGAGACAGTGGTAAATAC
GCACGATTTGTTGGTCCAGCAATGGAAAATATTTACAACGCGTTATCATCAGCAGGGTTGCAAAATCAAATCAAGGTCTCAACCGCGACATATTT
AGGGCTTTTAACCAACACCTACCCACCTAGAGATAGCATTTTTCGCGATGAATATAAAAGTTTCATCAATCCCATAATTGGATTTCTATCAAGAC
ATAATCTTCCACTTTTAGCCAATATTTACCCTTATTTTGGCCATGCTGATGATAATGTTCCTCTTTCTTATGCACTTTTCAGCAACAAGGGCTAA
ACGATGCAGGATATCAAAATCTTTTCGATGCCCTTGTGGATTCAATGTATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374967] SGN-U562796 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188611 [Download][View] Facility Assigned ID: FA0AAD3AH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5