EST details — SGN-E374986

Search information 
Request: 374986Match: SGN-E374986
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181129Clone name: TUS-36-C15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181129 is on microarray TOM1 spot ID 1-1-2.3.15.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22831 [cLED-3-J6] Trace: SGN-T49052 EST: SGN-E228404 Direction: 5' Facility: TIGR
Clone: SGN-C181129 [TUS-36-C15] Trace: SGN-T187545 EST: SGN-E374987 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374986Length: 646 bp (869 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374986 [] (trimmed) GCGACTCACCTTACGCTAAGGTGAAAAATACTGAAGTTACAATTTTACAACATGTCCATTTATATGTGGCATGTTGTCAATAGATTAAAGTTACA
ATTTCACAGTATGGTCCCTTACTTATACATGGGATGCTTACAGGAAAATGAGTCCAGCACAAATGAACAATTAAACATTGAACAAAAAGCAAAAG
AGATTATCCAAAAGACAAAAGTGCATACACTTTCTCTTTTCTTTTTCAAGTTTGTTATCTTCTACGCTTTTTAAACTACAAGCTGCAAAGATGCA
AGAAAAGTCGAAAATGCAGAGGAAGAGATCATTGGTTGCTCGTAGAGCTTGGAATGTTCTCCGACTAGCCTTGTTATGGGCGAGAAAAGGTGGCA
TTTTCAAGAACAAACACCTTGTGGATCTCCGTTTGCTTCCTAAATATTTTAAAAGTCTTCGTCATACCAATGATCACTATGGGACACTGCATTAT
GGGGAGCGTGAGTTTTCCTTTGATGACACCCCTGTCTTTCATGTTAAGATGCATCGTCCTGCTTCCTTGCGTTTCAAGATGCCTAACATTCCCTG
CATTAAACCTCAAGTCGACTTTGACTTTGACTTTGAGCGCGAGGATGAAATGTACAATGATAACAATAATAATAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374986] SGN-U579198 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187544 [Download][View] Facility Assigned ID: FA0AAD24AB08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5