EST details — SGN-C37500
| Search information |
| Request: 37500 | Match: SGN-C37500 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37500 | Clone name: cLEG-42-E13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177470 is on microarray TOM1: SGN-S1-1-5.3.7.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177470 [TUS-26-K4] | Trace: SGN-T182365 | EST: SGN-E368232 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177470 [TUS-26-K4] | Trace: SGN-T182366 | EST: SGN-E368233 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259615 | Length: 593 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259615 [] (trimmed)
GTAGCTCAGATACATTAAAGAGTATCTCGAATACATTATAATATAAATTAAATACATAATATGTAGCTCGAATACATTATAAAATGGACCAGATA
AAATAAATCAAATACATAATATGTAATTCAATTACAGTAAATACTGGCTCGAATACATTAAAGAAATAAGAAGTATTAAAGATTTTCAAAAATAA
AATGAAATATTAAAAATAATAAAAATATTAGATGTGTTTTTTAGTAGTTTTTCCATGATCATAGTTCCAATGTTGTGAACAACCTTTTCAAATGC
CAAACAATTTTGTGGACTATGACAAACAAAAGAATTTGAAAAACTCGAAAGCCTAAATTCCGGTGGGTCTTCTAAAAAAAAATAGGTTGATGTTT
CGATAAATTGGTTTTTTCAATATATGGTTCAATAAATTCGTTAAACCTTTAATGTTGATGTTTCGATAAATTATTTTTTTTAATATATGGTTCAA
TAAATTCGTTAAACCTTTAATATTGTACAATCCTACTCAGTACTCCTTCACTATAATTATCATATTAGTTTCTAGTTTCAACTTCCCTTTTTTTT
TTATGGACTCTGTCCATTCATGA
AAATAAATCAAATACATAATATGTAATTCAATTACAGTAAATACTGGCTCGAATACATTAAAGAAATAAGAAGTATTAAAGATTTTCAAAAATAA
AATGAAATATTAAAAATAATAAAAATATTAGATGTGTTTTTTAGTAGTTTTTCCATGATCATAGTTCCAATGTTGTGAACAACCTTTTCAAATGC
CAAACAATTTTGTGGACTATGACAAACAAAAGAATTTGAAAAACTCGAAAGCCTAAATTCCGGTGGGTCTTCTAAAAAAAAATAGGTTGATGTTT
CGATAAATTGGTTTTTTCAATATATGGTTCAATAAATTCGTTAAACCTTTAATGTTGATGTTTCGATAAATTATTTTTTTTAATATATGGTTCAA
TAAATTCGTTAAACCTTTAATATTGTACAATCCTACTCAGTACTCCTTCACTATAATTATCATATTAGTTTCTAGTTTCAACTTCCCTTTTTTTT
TTATGGACTCTGTCCATTCATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259615] | SGN-U573028 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72376 [Download][View] | Facility Assigned ID: TBFGI31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.892 | Expected Error Rate: 0.0110 | Quality Trim Threshold: 14.5 |
Working
