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EST details — SGN-E375005

Search information 
Request: 375005Match: SGN-E375005
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181231Clone name: TUS-36-G21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181231 is on microarray TOM1 spot ID 1-1-4.3.14.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23499 [cLED-5-I9] Trace: SGN-T49583 EST: SGN-E230967 Direction: 5' Facility: TIGR
Clone: SGN-C181231 [TUS-36-G21] Trace: SGN-T187564 EST: SGN-E375006 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375005Length: 695 bp (868 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375005 [] (trimmed) ATAAATTAAAACTGTAATATAATTATTTGTTCTTAAAAGAAGATAGAATATTGCCCCGTGCGATAAAACTGTGTTCTTGTAGTAAACATTTTCAC
CCAAAAAAGTGAGACTTTGTTAAGAATATGCAGGAAATGGGATCATTACTTAAGAGATTTCGACTTAGTATTAGACGATCCTCCCTGATGGGAAA
ACAAAATTGAAATATCAAAAACTCAACTCTAATGCAAGCACAGATAAATATAGAAAAACATAGCCTCAGGGGGTCCTAAAGCTCCATCTCCAATT
TCTATCTAATGAGACTTCACATACTCTTGGACGATATGGAGACCCTCAGTCTCTTCACCGTAATCCTTCACGACAACACAGCCACAACCAACAAC
CTTCCTTGCTTTACCTTCAGAATCAATCTTACATAAACCAGCCCATTCGCCAAGAGTCTTTGCATTGGGAACTGTAATCAAACTGACGTTGTGAT
CAGCACAAAGTCCTTTCACCAGTTTGACATAATCTGGCTGATCACAGTCCTCTGCTAGCACACAAAGCTGTGCAGCATGCTTCTCAATGACCTTA
GCACCTTCATGAAGTCCTCGAGCAAGCCCTCCATGAGCTTTAGACTTCCTGAGCACCAGCTGCAGAGCAGTCATGATATCCATGGGCTCTCCAAG
TGCTGGAGCAGGAGTCTCGACAGCGGGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375005] SGN-U572069 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187563 [Download][View] Facility Assigned ID: FA0AAD24AD11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0035 Quality Trim Threshold: 12.5