EST details — SGN-E375146

Search information 
Request: 375146Match: SGN-E375146
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180377Clone name: TUS-34-D7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180377 is on microarray TOM1 spot ID 1-1-2.4.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C45731 [cLEG-9-A17] Trace: SGN-T65473 EST: SGN-E251390 Direction: 5' Facility: TIGR
Clone: SGN-C180377 [TUS-34-D7] Trace: SGN-T187047 EST: SGN-E375145 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375146Length: 661 bp (903 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375146 [] (trimmed) GGCCACTCGAAAGTGGTAGTGAAGATGAAGTAGGTGGAAGTGGTAACACATTTGGTAATTAATGAGATCCGGTTGTCAGGTCTTTAAGCAGTGTT
AAGGTACTGTATAGTTGTTGTTACTACTAATTAGGAACATCCAAGAGAATAATTTTGCCATAGATCTGCTGGAGAATTGTAAATCATGATGCATA
ATCACGCTTCTGCCAATAATCAAACAAGCAAGTGTTAAAATCCTGTAATTTTTGTTATGGCAATTTCATGTGTTGCTTGTCGTAATAGTAGTCTA
TTGTGATTGATACCCGTACAAGCAATAATAACATTCTCTAATTTTGGTTGAAAAAAAAAAAAAAAAAAAACTCGAAACTAGTTCTCTCCGCCGTT
ACTCGCCGTTAACTGACGGCGGCGGAGTAACGCTAGAGCTCACCACGACCACCAATTCGCCGCTAGCAATCGACGTGACGGAATCGACGGAGATG
AGAATCCGGCGACTGATCACCGAGAATCCCGTCGTTATTTTCACCCGATCCGGCTGCTGCATGTGCCACGTCATGAAACGGCTGTTATTATCCGC
CGTTAGCGTTCACCCAACCGTTATTCAACTGGAAGAAGAAGAGATCGCCGCCCTCCCTGCCGGCGCCGGAGACGGCGCGGAGGACGGCGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375146] SGN-U572525 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187048 [Download][View] Facility Assigned ID: FA0AAD22CB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5