EST details — SGN-E375217

Search information 
Request: 375217Match: SGN-E375217
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180337Clone name: TUS-34-B15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180337 is on microarray TOM1 spot ID 1-1-2.2.19.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C45560 [cLEG-8-G10] Trace: SGN-T65277 EST: SGN-E252021 Direction: 5' Facility: TIGR
Clone: SGN-C180337 [TUS-34-B15] Trace: SGN-T187118 EST: SGN-E375216 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375217Length: 700 bp (911 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375217 [] (trimmed) GTCAGGCTAATATCCATAGAAAGTTTACTTTATGTTAAGTTTGCGTGGGACAGGGTAATCATGAAACCTTGGCCGATATATCTGGCGGCTCGTAT
TGTTTGTTGACCATAATTTATGAATTCAGTTATCATAGGGAGCATATGTTGAATATCTATAAAAAAACATTTTATGCTTGTTTCTTTCTCTTGTT
TGAGACAAGTCGTGAATCTAGGATATTGTGGTCTTTTACAGTGAAAGAAGTTGGGACGAGGTTGTAAATAATAGATTACCTAGAGAAATCGGTTA
AAGAAATTTCCACCCAAGATTTGCATTTTTTCTATCTAAACAAGTTGATTACATGTATTTATAAATTTTAGAAATTAGAATTTGGCTGTAGTTTT
GTAATATTTCCTGTGAAATTGTTGAGATAATTTCTTTTCAGAAATTAAATAAGGGTGTTGTCCAGACCAGCTTGCTTGTTGAGATCATTTTTGCT
TCCTGTGTGTGCGAGTAAGTGCTTGATAAGATATCATGACAGCCAATTATAAGCTTGTTAGTTTCCTCTAGGAGGGGAACAGACGACAATTTCTG
TAGAAGTATTTGCAGATGGCCTTTGTAAATAACTAGCTTTCATGGTAAGCAAGCAAGCTTGTTTTGGAAAAAAGAAGGTACCTTTTGTCATGTTT
GTAAAATATGTATTCTTGTGGACAGGCTCAACAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375217] SGN-U580027 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187119 [Download][View] Facility Assigned ID: FA0AAD22CA08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5