EST details — SGN-E375220

Search information 
Request: 375220Match: SGN-E375220
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180375Clone name: TUS-34-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180375 is on microarray TOM1 spot ID 1-1-4.4.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C45683 [cLEG-8-N16] Trace: SGN-T65467 EST: SGN-E252211 Direction: 5' Facility: TIGR
Clone: SGN-C180375 [TUS-34-D5] Trace: SGN-T187123 EST: SGN-E375221 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375220Length: 750 bp (932 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375220 [] (trimmed) AGTTATGCATCTTTTTATTGGAGCACATACAATTTTTAGAGCCAAAATCATCAGCTAGGCAAGGAGGCAGAGCTTTTACATCTTGGTACCACTTA
TAGTTCCTCTCTTGCATTAGATCTTTGAAGAAACTATCTATAGTTTCTCTTGTAATACCTGGCATAATTACAACATGTGCCATGCCTCTTAAGCA
ACACAAGTTCCAACGACGAATGAATTTATGGTCACAAGGTCGTTCAAAAACAACAGTAATACTAAAATCATTCAGCATAACACTAATTCCTGCTT
CAAGAAGTCGATCTTTCAAATACCGAGCATTTTCAATGCATGTTATGGAATCTTGTTGCAATCTAGCATGTCCTTTCTTGCTTAAACAGTACCAT
AAGAATATTGGTGTAAATCCATTTCGACTACCAGAAATTGTAGCATCTGCGGAATTAATATACTCAATTTTTGAGAGGGTGCTAACGTAACTTCT
CCTTGTTATCTGAACGCCACAAGACATTGGACATCCCAAGAATTTGTGCCCTGAAATTGAAATACTTCCAATTGGTTTCTTGAAGGTAATTTTTT
TTGCCTATTGTCAAATACCATAGAAAGAAACTATGTCATTGTAACTTCGATCGAGCGTTGAAGGAAAATTGAATAAAAATAAGCTTACATGTTTG
ATAAATGGGAGAATTAGCCCACATAATGCTGCATCGCAATGGATATAATAATTGTCATTTGAATAACCACAATTTTCAAGTGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375220] SGN-U580314 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187122 [Download][View] Facility Assigned ID: FA0AAD22CB03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5