EST details — SGN-E375252

Search information 
Request: 375252Match: SGN-E375252
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180489Clone name: TUS-34-H23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180489 is on microarray TOM1 spot ID 1-1-2.4.19.13 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C31321 [cLEG-13-A17] Trace: SGN-T66356 EST: SGN-E250877 Direction: 5' Facility: TIGR
Clone: SGN-C180489 [TUS-34-H23] Trace: SGN-T187155 EST: SGN-E375253 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375252Length: 689 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375252 [] (trimmed) CAGAGTTATAATAACGAACACTCTTTAAGAAAAAAGTATTTGATCAAACTCGTGAGTGAGTACAACTTTCATGTTACAGTCCCCAAAAAGGTATA
AAAATCTAAAATAATCGTAACCACAATAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCT
AATCTCAACAAATACTTCCATGGGACAACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACA
GTAAAACCAAAAATAATAACTTCAATATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAAT
GCACCACATGGTCTTCATGAGAACTGTGAATTGTCATATATCATGAAAACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTA
GCATCATAATATGCTTAATAAAACCCCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAGAAGAATGACCAGGCTAC
CATACTGTGTTAATGATGCACACGACAGATTCAGACAAGCAACAGCAACAAGTTTAGGAGTTAAAAGTTGAGTGTTTCAAAATGTACAGGAACAA
CCCCACAGTGTGACCAAAATGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375252] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187154 [Download][View] Facility Assigned ID: FA0AAD22CD12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0092 Quality Trim Threshold: 14.5