EST details — SGN-E375253

Search information 
Request: 375253Match: SGN-E375253
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180489Clone name: TUS-34-H23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180489 is on microarray TOM1 spot ID 1-1-2.4.19.13 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C31321 [cLEG-13-A17] Trace: SGN-T66356 EST: SGN-E250877 Direction: 5' Facility: TIGR
Clone: SGN-C180489 [TUS-34-H23] Trace: SGN-T187154 EST: SGN-E375252 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375253Length: 688 bp (867 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375253 [] (trimmed) TTGAATCATAGAACGTTATGGTGAATCCAAGGTTATGATGGTTTAATTTTGATGTTTATAATTATTTAAATGTTTTATTTGCTTAAGTTTTTATC
GATGCATGCACATGTACGAGAGATAAAAGAATGAGTTGAGGTTGTGCGAGGTTTGAGAGGAAAAAAGTGAGGTGTTTACTGTTTTATGTTGCCAG
GCCTTTGCCATGTTGGGTGCGCTCGCATGGCAGGCCAAAAGTACCTAATAAAACTATATTTTTTGGTGTTGGAGAGGAGAGGCACAGGGTTTTGC
CTGGATCTCCTCTCTGTGTGTGTCGCCTCTTTTATTTTTTCATGTTCTTTCCCTGCTCCTGCGTCCAACAATCTCGCACCGATCCAGTGGTTACT
TGTTTTTTATGGACAAGTTATTCGTGTTGAATTGCTTAATATGGCGATGGACAAAGCAACGTTTCTACTGCTGCACTCCTCAGAGGTACATAATC
AATTTTACATTATCAGCATCCATATATTAATTACTTTTCCTCTATAATCACCTACACAGTAATGGTAATATCTCTAATCAATAGTTGTAGAATCA
TTCAACAAGCCGCACAAAGCTTAGTCTTTTATATGTAGTCACATACAGCTGATTATTGAAGCAGCTTTAAACTATTTTATAAAATATTTTGGCTG
GTCTCCCCTCTCAACTCTATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375253] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187155 [Download][View] Facility Assigned ID: FA0AAD22CD12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5