EST details — SGN-E375359

Search information 
Request: 375359Match: SGN-E375359
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173370Clone name: TUS-15-P8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173370 is on microarray TOM1 spot ID 1-1-1.4.20.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2151 [cLEC-14-P4] Trace: SGN-T26533 EST: SGN-E204917 Direction: 5' Facility: TIGR
Clone: SGN-C173370 [TUS-15-P8] Trace: SGN-T188974 EST: SGN-E375360 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375359Length: 736 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375359 [] (trimmed) ATATCAAATCAAACAGTATCACGTAAATTAAGATAAAACTAGTAAATATGATATAGTGTTAGTTAATAATGTGTAGGGCCTTTTCTTTTTGGCCA
TGATGTTGACAAGTGACAACCTTAAGTATCATTTTTTTTTGCAAACTACTATTCTTGTCCTTATAAATTCTCACTTCTAATTGTATTCTAACTAT
TTCTTCATCTTGCCAATCACCAAAATAAATCAATACAAAGAGAGGCAAATATGGCCTTAGAACAAATTTTTCAAGACCAAATAGTGGAATTTGAT
CAACGCGATAATTCTTTTGAAAAATGGAAGACAAGCAATCTCGATAAACTTGAAGAAAATTCACCTCAAGGTTTCGAGTGCAACATTTGTCTAGA
TCTTGTGCATGATCCTGTTGTTACATTATGTGGTCACCTCTATTGTTGGCCTTGTATCTACAAATGGATACATTATAACGCCTTATCATCTGAAA
ACATCGATAACAAACAGCCAAAATGCCCTGTTTGCAAAGCTGAAGTCTCACAAAAAACATTGATTCCACTCTATGGCCGCGGTCAAGCTACAAAA
ACATCAACCAAGGCCATGAGTCTTGGTCTAGTCATACCACAAAGACCTCCTAGTCCGAGATGTACGAGTCACGGACTAATAGATAATAATAATAT
TTCTCCTTTATCTCATGATGATCATCGAAATCATATAACTTTAGAACATATGCTAAGTCCTGGCCTTGCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375359] SGN-U579610 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188973 [Download][View] Facility Assigned ID: FA0AAD3DH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0082 Quality Trim Threshold: 12.5