EST details — SGN-E375434

Search information 
Request: 375434Match: SGN-E375434
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180338Clone name: TUS-34-B16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180338 is on microarray TOM1 spot ID 1-1-1.2.19.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C32960 [cLEG-24-L21] Trace: SGN-T67676 EST: SGN-E253428 Direction: 5' Facility: TIGR
Clone: SGN-C180338 [TUS-34-B16] Trace: SGN-T187203 EST: SGN-E375435 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375434Length: 716 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375434 [] (trimmed) ACTAGTTCTCCAAAGGCGAAGAGAAACAGTTCTCTGCTGAAGAAATCTCCTCTATGGTTCTTATTAAGATGAAGGAGATAGCTGAGGCTTTTCTT
GGAACAACAATAAAGAATGCTGTTGTTACTGTGCCTGCGTATTTCAATGACTCTCAACGTCAGGCTACTAAGGATGCTGGAACTATTTCTGGGCT
CAATGTTATGCGTATTATCAACGAGCCTACTGCTGCTGCAATTGCATATGGACTTGATAAGAAATCAAGTAGTACAGGGGAGAAAACTGTGCTTA
TTTTTGACTTGGGTGGTGGTACGTTTGATGTCTCACTACTTACTATTGAGGAAGGTATTTTTGAAGTGAAAGCTACTGCTGGTGATACTCATCTT
GGTGGAGAAGATTTTGACAACAGGATGGTTAATCACTTTGTTCAAGAATTCAAGAGGAAGCACAAGAAGGACATCAGTGGGAATCCCAGAGCTCT
TAGGAGATTAAGAACTGCATGTGAAAGAGCTAAGAGAACACTCTCATCCACTGCTCAGACAACTATTGAAATTGATTCTCTTTATGAGGGTATTG
ATTTCTACACAACGATCACCCGTGCTCGTTTTGAGGAGCTCAACATGGATCTTTTCAGAAAATGTATGGAGCCTGTTGAGAAGTGTTTGAGGGAT
GCTAAAATTGACAAGAGTGGTGTTCATGATATTGTTCTTGTTGGTGGCTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375434] SGN-U579872 Tomato 200607 Build 2 71 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187202 [Download][View] Facility Assigned ID: FA0AAD22DA08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0008 Quality Trim Threshold: 12.5